RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 UBN2Q6ZU65 1347 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 AKAP11Q9UKA4 1901 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 SRRM3A6NNA2 597 aaPredicted RBP7.8□□□□□ -1.16
KRT39-203ENST00000578078 MAFGO15525 162 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 COQ9O75208 318 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 RTN2O75298 545 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 SETSIPP0DME0 302 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 CTHP32929 405 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 SCRN1Q12765 414 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 ITPK1Q13572 414 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 ADCK5Q3MIX3 580 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 BEND6Q5SZJ8 279 aaPredicted RBP7.8□□□□□ -1.16
KRT39-203ENST00000578078 USPL1Q5W0Q7 1092 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 ATL3Q6DD88 541 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 KCNV1Q6PIU1 500 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 HS2ST1Q7LGA3 356 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 CCAR1Q8IX12 1150 aaKnown RBP7.8□□□□□ -1.16
KRT39-203ENST00000578078 MAB21L3Q8N8X9 362 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 CCDC26Q8TAB7 109 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
KRT39-203ENST00000578078 PARD6BQ9BYG5 372 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 VPS18Q9P253 973 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 MTMR6Q9Y217 621 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 AK5Q9Y6K8 562 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 MROH5Q6ZUA9 1318 aa7.8□□□□□ -1.16
KRT39-203ENST00000578078 H3BQF6 201 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 RNF113AO15541 343 aaKnown RBP7.79□□□□□ -1.16
KRT39-203ENST00000578078 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
KRT39-203ENST00000578078 CAMTA2O94983 1202 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 ZFYP08048 801 aaPredicted RBP7.79□□□□□ -1.16
KRT39-203ENST00000578078 RPS6KB1P23443 525 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 ZMYM1Q5SVZ6 1142 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 TRIM65Q6PJ69 517 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 MICALCLQ6ZW33 695 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 CEP57L1Q8IYX8 460 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 SYNE4Q8N205 404 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 CHAMP1Q96JM3 812 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.79□□□□□ -1.16
KRT39-203ENST00000578078 ALDH8A1Q9H2A2 487 aaPredicted RBP7.79□□□□□ -1.16
KRT39-203ENST00000578078 ZCCHC17Q9NP64 241 aaKnown RBP7.79□□□□□ -1.16
KRT39-203ENST00000578078 LY75O60449 1722 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 A0A1B0GUL6 1792 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 SBF2Q86WG5 1849 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 GOLGA6L4A6NEF3 574 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 BECN2A8MW95 431 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 CPA1P15085 419 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 ADORA1P30542 326 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 INPP5BP32019 993 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 AMPD3Q01432 767 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 PPP2R3AQ06190 1150 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 CCDC152Q4G0S7 254 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 FILIP1LQ4L180 1135 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 RNF19BQ6ZMZ0 732 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 CCDC129Q6ZRS4 1044 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 ANKRD23Q86SG2 305 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 HOMER1Q86YM7 354 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 APLFQ8IW19 511 aaPredicted RBP7.79□□□□□ -1.16
KRT39-203ENST00000578078 CNNM3Q8NE01 707 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 AFAP1L1Q8TED9 768 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 FBF1Q8TES7 1133 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 FRMD6Q96NE9 622 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 DSCC1Q9BVC3 393 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 KIAA1468Q9P260 1216 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 NIP7Q9Y221 180 aaKnown RBP eCLIP7.79□□□□□ -1.16
KRT39-203ENST00000578078 TAF1LQ8IZX4 1826 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 DOCK2Q92608 1830 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 RTL9Q8NET4 1388 aa7.79□□□□□ -1.16
KRT39-203ENST00000578078 MYO5AQ9Y4I1 1855 aaKnown RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 SHTN1A0MZ66 631 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 ARHGAP6O43182 974 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 KCNQ2O43526 872 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 SEC31AO94979 1220 aaKnown RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 PDE8BO95263 885 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 UQCRFS1P1P0C7P4 283 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 SLC8A1P32418 973 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 SMTNP53814 917 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 TBX4P57082 545 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 INHBEP58166 350 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 IFFO1Q0D2I5 559 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 USP4Q13107 963 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 TTF1Q15361 905 aaPredicted RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 PUM3Q15397 648 aaKnown RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 SLC5A9Q2M3M2 681 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 ARSIQ5FYB1 569 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 SUSD4Q5VX71 490 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 WDR93Q6P2C0 686 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 CLEC4GQ6UXB4 293 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 CCDC83Q8IWF9 413 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 ZNF483Q8TF39 744 aaPredicted RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 RUBCNQ92622 972 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 KAT2BQ92831 832 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 ZNF512BQ96KM6 892 aaPredicted RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 NEK1Q96PY6 1258 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 SEC62Q99442 399 aaKnown RBP7.78□□□□□ -1.16
KRT39-203ENST00000578078 ARHGAP9Q9BRR9 750 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 CARD6Q9BX69 1037 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 CFHR5Q9BXR6 569 aa7.78□□□□□ -1.16
KRT39-203ENST00000578078 NIF3L1Q9GZT8 377 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms