RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SART1O43290 800 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 HSD3B2P26439 372 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 GSCP56915 257 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 CASP8Q14790 479 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PPP6R3Q5H9R7 873 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 KSR1Q8IVT5 923 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 THOC1Q96FV9 657 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 CDK19Q9BWU1 502 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 SERTAD1Q9UHV2 236 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 CUL7Q14999 1698 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 FAM170AA1A519 330 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 SCRN1Q12765 414 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 MFN1Q8IWA4 741 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 UBL4BQ8N7F7 174 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 CCDC26Q8TAB7 109 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 STXBP3O00186 592 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 LONP1P36776 959 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 GLE1Q53GS7 698 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 CTAGE3PQ8IX95 158 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 TEX13AQ9BXU3 409 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 KLHL33A6NCF5 533 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 TMCC1O94876 653 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 EVI5O60447 810 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 TADA3O75528 432 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 NAA30Q147X3 362 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 SSH2Q76I76 1423 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 CYP7A1P22680 504 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 EPHB1P54762 984 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 CCDC80Q76M96 950 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 FBXL13Q8NEE6 735 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 EEF1B2P24534 225 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 SF3A3Q12874 501 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDH8-203ENST00000577390 GRAMD4Q6IC98 578 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 TTLL7Q6ZT98 887 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 KRT15P19012 456 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 NFKBIAP25963 317 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 CDC37L1Q7L3B6 337 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 TFIP11Q9UBB9 837 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 MKL2Q9ULH7 1088 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 COPG1Q9Y678 874 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 SMARCA5O60264 1052 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 ARIH2O95376 493 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 CPP00450 1065 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 RPL13P26373 211 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 ZNF304Q9HCX3 659 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 PPARGC1AQ9UBK2 798 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 COL17A1Q9UMD9 1497 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 TOM1O60784 492 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 PECAM1P16284 738 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 POLE2P56282 527 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 ACTN3Q08043 901 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 KRT12Q99456 494 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 EYA3Q99504 573 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
CDH8-203ENST00000577390 CACNA2D2Q9NY47 1150 aa9.62□□□□□ -0.87
CDH8-203ENST00000577390 UBXN1Q04323 297 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 GRIN1Q05586 938 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 DPP9Q86TI2 863 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 PASD1Q8IV76 773 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 PAPOLBQ9NRJ5 636 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 HYOU1Q9Y4L1 999 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 ATF7P17544 494 aaPredicted RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 PTPREP23469 700 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 WDR64B1ANS9 1081 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 TNNI1P19237 187 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 CAPRIN1Q14444 709 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 MFSD4BQ5TF39 518 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDH8-203ENST00000577390 NDE1Q9NXR1 346 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 SENP1Q9P0U3 644 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 NRBP1Q9UHY1 535 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 DMRT2Q9Y5R5 561 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 ATXN2Q99700 1313 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 SKIP12755 728 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 SERPINB6P35237 376 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 APBA1Q02410 837 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 KCNA1Q09470 495 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 HABP4Q5JVS0 413 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 DCPSQ96C86 337 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 PLIN2Q99541 437 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 HELLSQ9NRZ9 838 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 SLC12A6Q9UHW9 1150 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 MCM8Q9UJA3 840 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 EXOC7Q9UPT5 735 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 SOX5P35711 763 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 RECQLP46063 649 aaPredicted RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 IGBP1P78318 339 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 MRPS27Q92552 414 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 ABTB1Q969K4 478 aaPredicted RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 ASIC3Q9UHC3 531 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 SYNMO15061 1565 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms