RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 HOOK2Q96ED9 719 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 CSRNP1Q96S65 589 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 AMNQ9BXJ7 453 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 XPO4Q9C0E2 1151 aaKnown RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 NT5C3AQ9H0P0 336 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 JMJD4Q9H9V9 463 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMG6-217ENST00000575338 GPCPD1Q9NPB8 672 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 KCND1Q9NSA2 647 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 ZNF219Q9P2Y4 722 aaPredicted RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 FAM198AQ9UFP1 575 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 ZNRF3Q9ULT6 936 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 NFE2L3Q9Y4A8 694 aa7.67□□□□□ -1.18
SMG6-217ENST00000575338 FRMPD2Q68DX3 1309 aaPredicted RBP7.67□□□□□ -1.18
SMG6-217ENST00000575338 RBBP6Q7Z6E9 1792 aaKnown RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 H7C1D1 291 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 PSMA7O14818 248 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 KIF20AO95235 890 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 FGFR1OPO95684 399 aaKnown RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 RPN1P04843 607 aaKnown RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 SKILP12757 684 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 PRKCSHP14314 528 aaPredicted RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 EIF6P56537 245 aaKnown RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 TCP10Q12799 353 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 IKQ13123 557 aaPredicted RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 PAK1Q13153 545 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 KRT79Q5XKE5 535 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 TYW1BQ6NUM6 668 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 CNNM4Q6P4Q7 775 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 TMC6Q7Z403 805 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 FCHSD1Q86WN1 690 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 CHURC1Q8WUH1 139 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 MXD3Q9BW11 206 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 UBA5Q9GZZ9 404 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 TDRD3Q9H7E2 651 aaKnown RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 PSTPIP2Q9H939 334 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 BMP2KQ9NSY1 1161 aaPredicted RBP7.66□□□□□ -1.18
SMG6-217ENST00000575338 RWDD2AQ9UIY3 292 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 RABGAP1Q9Y3P9 1069 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 PAXBP1Q9Y5B6 917 aa7.66□□□□□ -1.18
SMG6-217ENST00000575338 PSDA5PKW4 1024 aaPredicted RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 DDTLA6NHG4 134 aaPredicted RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 SPDYE3A6NKU9 549 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 F5H6K3 240 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 TBX3O15119 743 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 PLA2G6O60733 806 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 PRR29P0C7W0 189 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 BMP3P12645 472 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 CLK2P49760 499 aaKnown RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 STAT2P52630 851 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 KLRC3Q07444 240 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 PSMD2Q13200 908 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 SPDYE2Q495Y8 402 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 COBLL1Q53SF7 1204 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 DALRD3Q5D0E6 543 aaKnown RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 JAKMIP3Q5VZ66 844 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 HAUS3Q68CZ6 603 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 SPECC1LQ69YQ0 1117 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 CIAPIN1Q6FI81 312 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 ISM2Q6H9L7 571 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 BTNL9Q6UXG8 535 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 USP49Q70CQ1 688 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 SV2BQ7L1I2 683 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 FAM160B2Q86V87 743 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 FBXO11Q86XK2 927 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 VSTM4Q8IW00 320 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 IGSF22Q8N9C0 903 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 ERMNQ8TAM6 284 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 RASGRP4Q8TDF6 673 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 IQCDQ96DY2 449 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 CCDC51Q96ER9 411 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 DHTKD1Q96HY7 919 aaPredicted RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 ZNF830Q96NB3 372 aaPredicted RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 NAA15Q9BXJ9 866 aaKnown RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 MTFR1LQ9H019 292 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 TAOK3Q9H2K8 898 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 KCNF1Q9H3M0 494 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 EXOC1Q9NV70 894 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 KBTBD4Q9NVX7 518 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 FANCLQ9NW38 375 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 MAGEC2Q9UBF1 373 aaPredicted RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 BIN2Q9UBW5 565 aaPredicted RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 LRWD1Q9UFC0 647 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 DDX25Q9UHL0 483 aaKnown RBP7.65□□□□□ -1.18
SMG6-217ENST00000575338 PCDHA1Q9Y5I3 950 aa7.65□□□□□ -1.18
SMG6-217ENST00000575338 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMG6-217ENST00000575338 DICER1Q9UPY3 1922 aaKnown RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 ITIH6Q6UXX5 1313 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 LTBP3Q9NS15 1303 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 PVALEFA0A1B0GWK0 134 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 YDJCA8MPS7 323 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 FOXN1O15353 648 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 ARHGAP6O43182 974 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 ZSCAN12O43309 604 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 RAD21O60216 631 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 RHOBTB3O94955 611 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 ASNSP08243 561 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 DPEP1P16444 411 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 ZNF18P17022 549 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 EEF1GP26641 437 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms