RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PAFAH1B1P43034 410 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 ZBED6P86452 979 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 ITIH3Q06033 890 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 SNCBQ16143 134 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 CCDC121Q6ZUS5 278 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 PARP9Q8IXQ6 854 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 RUBCNQ92622 972 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 PHF20Q9BVI0 1012 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 TSGA10Q9BZW7 698 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 CNNM2Q9H8M5 875 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 HAUS2Q9NVX0 235 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 RMND1Q9NWS8 449 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 HYOU1Q9Y4L1 999 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 PCDHA13Q9Y5I0 950 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 TCRBV5S4A2TA0A5A2 114 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.15
SMG6-215ENST00000574501 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.15
SMG6-215ENST00000574501 ATP2C2O75185 946 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.15
SMG6-215ENST00000574501 XBP1P17861 261 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 SATB1Q01826 763 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 TRADDQ15628 312 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 CYB5D1Q6P9G0 228 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 CYFIP2Q96F07 1278 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 FAM89AQ96GI7 184 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 SLC24A3Q9HC58 644 aa16.02■□□□□ 0.15
SMG6-215ENST00000574501 V9GY48 417 aaPredicted RBP16.02■□□□□ 0.15
SMG6-215ENST00000574501 DNM1LO00429 736 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 BACH1O14867 736 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 TATP17735 454 aaPredicted RBP16.01■□□□□ 0.15
SMG6-215ENST00000574501 ZC3H6P61129 1189 aaKnown RBP16.01■□□□□ 0.15
SMG6-215ENST00000574501 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
SMG6-215ENST00000574501 C6orf89Q6UWU4 347 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 MAATS1Q7Z4T9 603 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 FAXDC2Q96IV6 333 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 ATP6V1G3Q96LB4 118 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 CARD10Q9BWT7 1032 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 SALL4Q9UJQ4 1053 aa16.01■□□□□ 0.15
SMG6-215ENST00000574501 ADAMTS7Q9UKP4 1686 aa16■□□□□ 0.15
SMG6-215ENST00000574501 GOLGA6L7A0A1B0GV03 622 aa16■□□□□ 0.15
SMG6-215ENST00000574501 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
SMG6-215ENST00000574501 TCP1P17987 556 aaKnown RBP16■□□□□ 0.15
SMG6-215ENST00000574501 CABP4P57796 275 aa16■□□□□ 0.15
SMG6-215ENST00000574501 PLCB4Q15147 1175 aa16■□□□□ 0.15
SMG6-215ENST00000574501 IFT20Q8IY31 132 aa16■□□□□ 0.15
SMG6-215ENST00000574501 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
SMG6-215ENST00000574501 FUKQ8N0W3 1084 aa16■□□□□ 0.15
SMG6-215ENST00000574501 PLIN2Q99541 437 aa16■□□□□ 0.15
SMG6-215ENST00000574501 ZNF330Q9Y3S2 320 aaPredicted RBP16■□□□□ 0.15
SMG6-215ENST00000574501 NID2Q14112 1375 aa16■□□□□ 0.15
SMG6-215ENST00000574501 PHKA1P46020 1223 aa16■□□□□ 0.15
SMG6-215ENST00000574501 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
SMG6-215ENST00000574501 ITGB3BPQ13352 177 aaPredicted RBP16■□□□□ 0.15
SMG6-215ENST00000574501 C2CD5Q86YS7 1000 aa16■□□□□ 0.15
SMG6-215ENST00000574501 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
SMG6-215ENST00000574501 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
SMG6-215ENST00000574501 OSBPL7Q9BZF2 842 aa16■□□□□ 0.15
SMG6-215ENST00000574501 THAP9Q9H5L6 903 aa16■□□□□ 0.15
SMG6-215ENST00000574501 TPX2Q9ULW0 747 aaKnown RBP16■□□□□ 0.15
SMG6-215ENST00000574501 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
SMG6-215ENST00000574501 SPATA31A3Q5VYP0 1347 aa16■□□□□ 0.15
SMG6-215ENST00000574501 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
SMG6-215ENST00000574501 ATRNO75882 1429 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 OPLAHO14841 1288 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 BUB1O43683 1085 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 PLEKHA8P1O95397 391 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 BMP15O95972 392 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 RPSAP08865 295 aaKnown RBP15.99■□□□□ 0.15
SMG6-215ENST00000574501 PRLRP16471 622 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 TNFRSF8P28908 595 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 RNASE9P60153 205 aaKnown RBP15.99■□□□□ 0.15
SMG6-215ENST00000574501 LRCH2Q5VUJ6 765 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 ARHGAP20Q9P2F6 1191 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 LRP6O75581 1613 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 STAT6P42226 847 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 CLNS1AP54105 237 aaKnown RBP15.99■□□□□ 0.15
SMG6-215ENST00000574501 ALX1Q15699 326 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 QPCTQ16769 361 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 LDHAL6AQ6ZMR3 332 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 PIK3AP1Q6ZUJ8 805 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 ALS2CR12Q96Q35 445 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 GDF3Q9NR23 364 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 TJP1Q07157 1748 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
SMG6-215ENST00000574501 SCN11AQ9UI33 1791 aa15.99■□□□□ 0.15
SMG6-215ENST00000574501 AKAP11Q9UKA4 1901 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 CYP27B1O15528 508 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 EIF4A3P38919 411 aaKnown RBP15.98■□□□□ 0.15
SMG6-215ENST00000574501 KIF11P52732 1056 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 KCTD19Q17RG1 926 aaPredicted RBP15.98■□□□□ 0.15
SMG6-215ENST00000574501 TLR10Q9BXR5 811 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 PLAAQ9Y263 795 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 SMIM22K7EJ46 135 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 ADAMTS3O15072 1205 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms