RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.04■■□□□ 1.76
SNF8-216ENST00000573795 TMEM265A0A087WTH1 108 aa26.03■■□□□ 1.76
SNF8-216ENST00000573795 ORC4O43929 436 aa26.03■■□□□ 1.76
SNF8-216ENST00000573795 TNFAIP2Q03169 654 aa26.03■■□□□ 1.76
SNF8-216ENST00000573795 MAFAQ8NHW3 353 aaPredicted RBP26.03■■□□□ 1.76
SNF8-216ENST00000573795 CYP39A1Q9NYL5 469 aa26.03■■□□□ 1.76
SNF8-216ENST00000573795 CHD9Q3L8U1 2897 aa26.03■■□□□ 1.76
SNF8-216ENST00000573795 ASB14A6NK59 587 aa26.02■■□□□ 1.76
SNF8-216ENST00000573795 RANBP6O60518 1105 aaKnown RBP26.02■■□□□ 1.76
SNF8-216ENST00000573795 ALX1Q15699 326 aa26.02■■□□□ 1.76
SNF8-216ENST00000573795 ANKRD45Q5TZF3 282 aa26.02■■□□□ 1.76
SNF8-216ENST00000573795 EVI5LQ96CN4 794 aa26.02■■□□□ 1.76
SNF8-216ENST00000573795 PURBQ96QR8 312 aaKnown RBP26.02■■□□□ 1.76
SNF8-216ENST00000573795 CD4P01730 458 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 PDE1AP54750 535 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 TMEM63BQ5T3F8 832 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 TTBK2Q6IQ55 1244 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 SLC43A3Q8NBI5 491 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 VTI1AQ96AJ9 217 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 FAM227BQ96M60 508 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 CRBNQ96SW2 442 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 PDGFCQ9NRA1 345 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 HELLSQ9NRZ9 838 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 MTMR7Q9Y216 660 aa26.01■■□□□ 1.75
SNF8-216ENST00000573795 A0A0D9SFI3 127 aa26■■□□□ 1.75
SNF8-216ENST00000573795 SMPD1P17405 629 aa26■■□□□ 1.75
SNF8-216ENST00000573795 DNAJB2P25686 324 aa26■■□□□ 1.75
SNF8-216ENST00000573795 TMEM240Q5SV17 173 aa26■■□□□ 1.75
SNF8-216ENST00000573795 RASIP1Q5U651 963 aa26■■□□□ 1.75
SNF8-216ENST00000573795 TAPT1Q6NXT6 567 aa26■■□□□ 1.75
SNF8-216ENST00000573795 TLK2Q86UE8 772 aa26■■□□□ 1.75
SNF8-216ENST00000573795 DCAF4Q8WV16 495 aa26■■□□□ 1.75
SNF8-216ENST00000573795 RANBP17Q9H2T7 1088 aaKnown RBP26■■□□□ 1.75
SNF8-216ENST00000573795 GRIN2DO15399 1336 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.99■■□□□ 1.75
SNF8-216ENST00000573795 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.99■■□□□ 1.75
SNF8-216ENST00000573795 CSF2RAP15509 400 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 PPIGQ13427 754 aaKnown RBP eCLIP25.99■■□□□ 1.753e-7■■□□□ 12
SNF8-216ENST00000573795 CXCL17Q6UXB2 119 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 BTNL9Q6UXG8 535 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 FBXO16Q8IX29 292 aaPredicted RBP25.99■■□□□ 1.75
SNF8-216ENST00000573795 MORC4Q8TE76 937 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 PPP1R12CQ9BZL4 782 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 CCPG1Q9ULG6 757 aa25.99■■□□□ 1.75
SNF8-216ENST00000573795 FGAP02671 866 aa25.98■■□□□ 1.75
SNF8-216ENST00000573795 ICAM1P05362 532 aa25.98■■□□□ 1.75
SNF8-216ENST00000573795 FOSL2P15408 326 aa25.98■■□□□ 1.75
SNF8-216ENST00000573795 SLC16A2P36021 539 aa25.98■■□□□ 1.75
SNF8-216ENST00000573795 GRIN2CQ14957 1233 aa25.98■■□□□ 1.75
SNF8-216ENST00000573795 CCDC96Q2M329 555 aa25.98■■□□□ 1.75
SNF8-216ENST00000573795 FSCN1Q16658 493 aaKnown RBP25.97■■□□□ 1.75
SNF8-216ENST00000573795 NSMFQ6X4W1 530 aa25.97■■□□□ 1.75
SNF8-216ENST00000573795 NOL8Q76FK4 1167 aaKnown RBP25.97■■□□□ 1.75
SNF8-216ENST00000573795 EEPD1Q7L9B9 569 aa25.97■■□□□ 1.75
SNF8-216ENST00000573795 ZNF589Q86UQ0 364 aaPredicted RBP25.97■■□□□ 1.75
SNF8-216ENST00000573795 TMEM47Q9BQJ4 181 aa25.97■■□□□ 1.75
SNF8-216ENST00000573795 ZMYM6O95789 1325 aa25.96■■□□□ 1.75
SNF8-216ENST00000573795 TLR3O15455 904 aaKnown RBP25.96■■□□□ 1.75
SNF8-216ENST00000573795 ACRP10323 421 aa25.96■■□□□ 1.75
SNF8-216ENST00000573795 HDAC1Q13547 482 aaPredicted RBP25.96■■□□□ 1.75
SNF8-216ENST00000573795 UMODL1Q5DID0 1318 aa25.95■■□□□ 1.75
SNF8-216ENST00000573795 FRMPD2Q68DX3 1309 aaPredicted RBP25.95■■□□□ 1.75
SNF8-216ENST00000573795 GRXCR1A8MXD5 290 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 NFIBO00712 420 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 DYNC1LI2O43237 492 aaPredicted RBP25.95■■□□□ 1.74
SNF8-216ENST00000573795 HSPD1P10809 573 aaKnown RBP25.95■■□□□ 1.74
SNF8-216ENST00000573795 CYP2C18P33260 490 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 MCMDC2Q4G0Z9 681 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 SYDE2Q5VT97 1194 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 TMEM199Q8N511 208 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 VTA1Q9NP79 307 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 TCP11L1Q9NUJ3 509 aa25.95■■□□□ 1.74
SNF8-216ENST00000573795 GBF1Q92538 1859 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 CABYRO75952 493 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 TOP1P11387 765 aaKnown RBP25.94■■□□□ 1.74
SNF8-216ENST00000573795 PBX2P40425 430 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 NMIQ13287 307 aaPredicted RBP25.94■■□□□ 1.74
SNF8-216ENST00000573795 ITGA7Q13683 1181 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 BAATQ14032 418 aaPredicted RBP25.94■■□□□ 1.74
SNF8-216ENST00000573795 RRP12Q5JTH9 1297 aaKnown RBP25.94■■□□□ 1.74
SNF8-216ENST00000573795 IQSEC1Q6DN90 963 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 ZNF365Q70YC5 407 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 TIFAQ96CG3 184 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 AP5M1Q9H0R1 490 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 TOMM22Q9NS69 142 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 Q9Y3F1 56 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 CHD7Q9P2D1 2997 aa25.94■■□□□ 1.74
SNF8-216ENST00000573795 PBX4Q9BYU1 374 aa25.93■■□□□ 1.74
SNF8-216ENST00000573795 ZNF576Q9H609 170 aa25.93■■□□□ 1.74
SNF8-216ENST00000573795 GPCPD1Q9NPB8 672 aa25.93■■□□□ 1.74
SNF8-216ENST00000573795 ZBTB47Q9UFB7 747 aaPredicted RBP25.93■■□□□ 1.74
SNF8-216ENST00000573795 PDHBP11177 359 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 ALDH5A1P51649 535 aaPredicted RBP25.92■■□□□ 1.74
SNF8-216ENST00000573795 HAND2P61296 217 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 PSMC6P62333 389 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 PSRC1Q6PGN9 363 aaPredicted RBP25.92■■□□□ 1.74
SNF8-216ENST00000573795 SLC30A10Q6XR72 485 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 USP38Q8NB14 1042 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 CLEC4DQ8WXI8 215 aa25.92■■□□□ 1.74
SNF8-216ENST00000573795 IL23AQ9NPF7 189 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms