RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 SOWAHBA6NEL2 793 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 CTAGE5O15320 804 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 ICAM1P05362 532 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 FOSL2P15408 326 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 ANKRD45Q5TZF3 282 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 PSRC1Q6PGN9 363 aaPredicted RBP18.36■□□□□ 0.53
TSR1-202ENST00000571806 MYLIPQ8WY64 445 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 CYP39A1Q9NYL5 469 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 ADD3Q9UEY8 706 aaKnown RBP18.36■□□□□ 0.53
TSR1-202ENST00000571806 CCPG1Q9ULG6 757 aa18.36■□□□□ 0.53
TSR1-202ENST00000571806 FOXP2O15409 715 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 CD4P01730 458 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
TSR1-202ENST00000571806 DNAJB2P25686 324 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 FSCN1Q16658 493 aaKnown RBP18.35■□□□□ 0.53
TSR1-202ENST00000571806 BTNL9Q6UXG8 535 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 SLC43A3Q8NBI5 491 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.534e-8■■□□□ 14.2
TSR1-202ENST00000571806 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
TSR1-202ENST00000571806 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
TSR1-202ENST00000571806 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
TSR1-202ENST00000571806 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.34■□□□□ 0.53
TSR1-202ENST00000571806 TOP1P11387 765 aaKnown RBP18.34■□□□□ 0.53
TSR1-202ENST00000571806 MCMDC2Q4G0Z9 681 aa18.34■□□□□ 0.53
TSR1-202ENST00000571806 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
TSR1-202ENST00000571806 MORC4Q8TE76 937 aa18.34■□□□□ 0.53
TSR1-202ENST00000571806 RANBP17Q9H2T7 1088 aaKnown RBP18.34■□□□□ 0.53
TSR1-202ENST00000571806 NMT2O60551 498 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 CSF2RAP15509 400 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 PDE1AP54750 535 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 IRX5P78411 483 aaPredicted RBP18.33■□□□□ 0.52
TSR1-202ENST00000571806 BEX3Q00994 111 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 ITGA7Q13683 1181 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 CCDC96Q2M329 555 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 CXCL17Q6UXB2 119 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 TIFAQ96CG3 184 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 TTC14Q96N46 770 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 MPHOSPH6Q99547 160 aaKnown RBP18.33■□□□□ 0.52
TSR1-202ENST00000571806 ZNF576Q9H609 170 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 INCENPQ9NQS7 918 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
TSR1-202ENST00000571806 ASTN1O14525 1302 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
TSR1-202ENST00000571806 FGAP02671 866 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 SMPD1P17405 629 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 NT5C2P49902 561 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
TSR1-202ENST00000571806 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
TSR1-202ENST00000571806 AAMPQ13685 434 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 C16orf59Q7L2K0 433 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 SYMPKQ92797 1274 aaKnown RBP18.32■□□□□ 0.52
TSR1-202ENST00000571806 IL23AQ9NPF7 189 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 CDH23Q9H251 3354 aa18.32■□□□□ 0.52
TSR1-202ENST00000571806 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
TSR1-202ENST00000571806 GRIN2CQ14957 1233 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 DUSP28Q4G0W2 176 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 ZNF365Q70YC5 407 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 CHMP4CQ96CF2 233 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 PPP1R12CQ9BZL4 782 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 HIPK3Q9H422 1215 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 MTMR7Q9Y216 660 aa18.31■□□□□ 0.52
TSR1-202ENST00000571806 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 B4DLN1 442 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 FGBP02675 491 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 HSPD1P10809 573 aaKnown RBP18.3■□□□□ 0.52
TSR1-202ENST00000571806 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
TSR1-202ENST00000571806 SNAP25P60880 206 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 RAB30Q15771 203 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 RPUSD2Q8IZ73 545 aaKnown RBP18.3■□□□□ 0.52
TSR1-202ENST00000571806 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 MAF1Q9H063 256 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
TSR1-202ENST00000571806 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
TSR1-202ENST00000571806 SUPT20HL2P0C7V6 817 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 CYP2C18P33260 490 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 CPT1AP50416 773 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 ALDH5A1P51649 535 aaPredicted RBP18.29■□□□□ 0.52
TSR1-202ENST00000571806 BAATQ14032 418 aaPredicted RBP18.29■□□□□ 0.52
TSR1-202ENST00000571806 BRDTQ58F21 947 aaPredicted RBP18.29■□□□□ 0.52
TSR1-202ENST00000571806 RRP12Q5JTH9 1297 aaKnown RBP18.29■□□□□ 0.52
TSR1-202ENST00000571806 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 FBXO16Q8IX29 292 aaPredicted RBP18.29■□□□□ 0.52
TSR1-202ENST00000571806 GAS2L1Q99501 681 aaPredicted RBP18.29■□□□□ 0.52
TSR1-202ENST00000571806 PBX4Q9BYU1 374 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 MSRAQ9UJ68 235 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
TSR1-202ENST00000571806 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms