RNA–Protein interactions for RNA: ENST00000571484.1

CBX2-203, Transcript of chromobox 2, humanhuman

TSL 1 (best)

Gene CBX2, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-203ENST00000571484 TMEM47Q9BQJ4 181 aa22.72■■□□□ 1.23
CBX2-203ENST00000571484 TCP11L1Q9NUJ3 509 aa22.72■■□□□ 1.23
CBX2-203ENST00000571484 DDX49Q9Y6V7 483 aaKnown RBP22.72■■□□□ 1.23
CBX2-203ENST00000571484 MCM3APO60318 1980 aa22.72■■□□□ 1.23
CBX2-203ENST00000571484 ICAM1P05362 532 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 TOP1P11387 765 aaKnown RBP22.71■■□□□ 1.23
CBX2-203ENST00000571484 HAND2P61296 217 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 NKX3-2P78367 333 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 SMAD3P84022 425 aaKnown RBP22.71■■□□□ 1.23
CBX2-203ENST00000571484 TNFAIP2Q03169 654 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 FPGSQ05932 587 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 AAMPQ13685 434 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 BTNL9Q6UXG8 535 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 RILPL2Q969X0 211 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 VTI1AQ96AJ9 217 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 RANBP17Q9H2T7 1088 aaKnown RBP22.71■■□□□ 1.23
CBX2-203ENST00000571484 TBX21Q9UL17 535 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 ZMYM6O95789 1325 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 CCDC171Q6TFL3 1326 aa22.71■■□□□ 1.23
CBX2-203ENST00000571484 ARVCFO00192 962 aa22.7■■□□□ 1.22
CBX2-203ENST00000571484 DLL1O00548 723 aa22.7■■□□□ 1.22
CBX2-203ENST00000571484 SYDE2Q5VT97 1194 aa22.7■■□□□ 1.22
CBX2-203ENST00000571484 B4GALNT3Q6L9W6 998 aa22.7■■□□□ 1.22
CBX2-203ENST00000571484 NOL8Q76FK4 1167 aaKnown RBP22.7■■□□□ 1.22
CBX2-203ENST00000571484 RNPC3Q96LT9 517 aaKnown RBP22.7■■□□□ 1.22
CBX2-203ENST00000571484 GNEQ9Y223 722 aaKnown RBP22.7■■□□□ 1.22
CBX2-203ENST00000571484 MROH7Q68CQ1 1323 aa22.7■■□□□ 1.22
CBX2-203ENST00000571484 FRMPD2Q68DX3 1309 aaPredicted RBP22.7■■□□□ 1.22
CBX2-203ENST00000571484 PRUNE2Q8WUY3 3088 aa22.7■■□□□ 1.22
CBX2-203ENST00000571484 A0A0U1RQG5 324 aaPredicted RBP22.69■■□□□ 1.22
CBX2-203ENST00000571484 TIMP1P01033 207 aa22.69■■□□□ 1.22
CBX2-203ENST00000571484 BEX3Q00994 111 aa22.69■■□□□ 1.22
CBX2-203ENST00000571484 NSMFQ6X4W1 530 aa22.69■■□□□ 1.22
CBX2-203ENST00000571484 PURBQ96QR8 312 aaKnown RBP22.69■■□□□ 1.22
CBX2-203ENST00000571484 SEMA6BQ9H3T3 888 aa22.69■■□□□ 1.22
CBX2-203ENST00000571484 RWDD1Q9H446 243 aaPredicted RBP22.69■■□□□ 1.22
CBX2-203ENST00000571484 GPCPD1Q9NPB8 672 aa22.69■■□□□ 1.22
CBX2-203ENST00000571484 PTGS1P23219 599 aa22.68■■□□□ 1.22
CBX2-203ENST00000571484 AKNAD1Q5T1N1 836 aa22.68■■□□□ 1.22
CBX2-203ENST00000571484 TBC1D10CQ8IV04 446 aa22.68■■□□□ 1.22
CBX2-203ENST00000571484 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
CBX2-203ENST00000571484 PDGFCQ9NRA1 345 aa22.68■■□□□ 1.22
CBX2-203ENST00000571484 PDHBP11177 359 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 PCP11498 1178 aaKnown RBP22.67■■□□□ 1.22
CBX2-203ENST00000571484 SMPD1P17405 629 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 SDSP20132 328 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 TAPT1Q6NXT6 567 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 MFSD6Q6ZSS7 791 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 EEPD1Q7L9B9 569 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 TLK2Q86UE8 772 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 CHD1LQ86WJ1 897 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 PLEKHM2Q8IWE5 1019 aa22.67■■□□□ 1.22
CBX2-203ENST00000571484 FBXO16Q8IX29 292 aaPredicted RBP22.67■■□□□ 1.22
CBX2-203ENST00000571484 VCANP13611 3396 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 CUL9Q8IWT3 2517 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 NFIBO00712 420 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 IGHDP01880 384 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 NUCB1Q02818 461 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 BAATQ14032 418 aaPredicted RBP22.66■■□□□ 1.22
CBX2-203ENST00000571484 IQSEC1Q6DN90 963 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 MFSD5Q6N075 450 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 CXCL17Q6UXB2 119 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 FAM126BQ8IXS8 530 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 MORC4Q8TE76 937 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 TTC14Q96N46 770 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 CDX2Q99626 313 aaPredicted RBP22.66■■□□□ 1.22
CBX2-203ENST00000571484 AP5M1Q9H0R1 490 aa22.66■■□□□ 1.22
CBX2-203ENST00000571484 TTYH1Q9H313 450 aaPredicted RBP22.66■■□□□ 1.22
CBX2-203ENST00000571484 DYNC1LI2O43237 492 aaPredicted RBP22.65■■□□□ 1.22
CBX2-203ENST00000571484 MFAP1P55081 439 aaKnown RBP22.65■■□□□ 1.22
CBX2-203ENST00000571484 FSCN1Q16658 493 aaKnown RBP22.65■■□□□ 1.22
CBX2-203ENST00000571484 TMEM63BQ5T3F8 832 aa22.65■■□□□ 1.22
CBX2-203ENST00000571484 OSBPL3Q9H4L5 887 aa22.65■■□□□ 1.22
CBX2-203ENST00000571484 VTA1Q9NP79 307 aa22.65■■□□□ 1.22
CBX2-203ENST00000571484 CABYRO75952 493 aa22.64■■□□□ 1.21
CBX2-203ENST00000571484 ZNF543Q08ER8 600 aa22.64■■□□□ 1.21
CBX2-203ENST00000571484 SLC43A3Q8NBI5 491 aa22.64■■□□□ 1.21
CBX2-203ENST00000571484 CLEC4DQ8WXI8 215 aa22.64■■□□□ 1.21
CBX2-203ENST00000571484 RNF41Q9H4P4 317 aaPredicted RBP22.64■■□□□ 1.21
CBX2-203ENST00000571484 ADD3Q9UEY8 706 aaKnown RBP22.64■■□□□ 1.21
CBX2-203ENST00000571484 TLR3O15455 904 aaKnown RBP22.63■■□□□ 1.21
CBX2-203ENST00000571484 CD4P01730 458 aa22.63■■□□□ 1.21
CBX2-203ENST00000571484 SNHG28P0DPA3 235 aa22.63■■□□□ 1.21
CBX2-203ENST00000571484 ALDH5A1P51649 535 aaPredicted RBP22.63■■□□□ 1.21
CBX2-203ENST00000571484 KIAA1211Q6ZU35 1233 aa22.63■■□□□ 1.21
CBX2-203ENST00000571484 ESR2Q92731 530 aa22.63■■□□□ 1.21
CBX2-203ENST00000571484 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.63■■□□□ 1.216e-7■■■■■ 26.9
CBX2-203ENST00000571484 Q9Y3F1 56 aa22.63■■□□□ 1.21
CBX2-203ENST00000571484 NEDD4P46934 1319 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 PTPDC1A2A3K4 754 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 ZNF213O14771 459 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 ZEB2O60315 1214 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 PPIGQ13427 754 aaKnown RBP eCLIP22.62■■□□□ 1.213e-7■■■■■ 26.9
CBX2-203ENST00000571484 ITGA7Q13683 1181 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
CBX2-203ENST00000571484 SLC30A10Q6XR72 485 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 C16orf59Q7L2K0 433 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 EXOC6Q8TAG9 804 aa22.62■■□□□ 1.21
CBX2-203ENST00000571484 ZKSCAN3Q9BRR0 538 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms