RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 GBP2P32456 591 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 PDE6BP35913 854 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 ZNF658Q5TYW1 1059 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 NAA35Q5VZE5 725 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 B4GALNT4Q76KP1 1039 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 NBPF5PQ86XG9 351 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 MSANTD4Q8NCY6 345 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 HNRNPLLQ8WVV9 542 aaKnown RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 CABS1Q96KC9 395 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 SPAG5Q96R06 1193 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 MED15Q96RN5 788 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 NBPF3Q9H094 633 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 PCCAP05165 728 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 GNAT2P19087 354 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 SEC24CP53992 1094 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 MYO1AQ9UBC5 1043 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 FAM184BQ9ULE4 1060 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 MDM2Q00987 491 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 APBA1Q02410 837 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 MCTP2Q6DN12 878 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 CABP7Q86V35 215 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 POTEDQ86YR6 584 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 TRIM58Q8NG06 486 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 DYDC1Q8WWB3 177 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
USP43-203ENST00000570827 LTN1O94822 1766 aa11.05□□□□□ -0.64
USP43-203ENST00000570827 WNT7AO00755 349 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 FOXP2O15409 715 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 SCG2P13521 617 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 NAA25Q14CX7 972 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 SGMS1Q86VZ5 419 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 IFT20Q8IY31 132 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 ARL8AQ96BM9 186 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 NOX5Q96PH1 765 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 TSG101Q99816 390 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 N4BP2Q86UW6 1770 aaPredicted RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 C1orf167Q5SNV9 1468 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 PDE8AO60658 829 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 CYP2D6P10635 497 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 CASP7P55210 303 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 PNMA8AQ86V59 439 aaPredicted RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 TBC1D31Q96DN5 1066 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 SEC63Q9UGP8 760 aaKnown RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 BICDL2A1A5D9 508 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 KCNK3O14649 394 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 TSPY3P0CV98 308 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 TSPY8P0CW00 308 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 AMPD3Q01432 767 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 CFAP221Q4G0U5 840 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 CCNI2Q6ZMN8 369 aaPredicted RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 BLIDQ8IZY5 108 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 CEP89Q96ST8 783 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 PYM1Q9BRP8 204 aaKnown RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
USP43-203ENST00000570827 BAIAP2L1Q9UHR4 511 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 HYOU1Q9Y4L1 999 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 MEGF6O75095 1541 aa11.04□□□□□ -0.64
USP43-203ENST00000570827 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 ARID4AP29374 1257 aaPredicted RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 TFAP4Q01664 338 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 DPH5Q9H2P9 285 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 RAB21Q9UL25 225 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 XDHP47989 1333 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 LGALS16A8MUM7 142 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 GOLGA8KD6RF30 607 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 GNPATO15228 680 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 FCER1AP12319 257 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 CALML3P27482 149 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 KIF11P52732 1056 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 RBM5P52756 815 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP43-203ENST00000570827 GFPT1Q06210 699 aaPredicted RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 CHRNDQ07001 517 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 LLGL1Q15334 1064 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 PCDHA13Q9Y5I0 950 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 WDR17Q8IZU2 1322 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 PDE2AO00408 941 aaPredicted RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 ARHGAP25P42331 645 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 TNNI2P48788 182 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 PMS1P54277 932 aaKnown RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
USP43-203ENST00000570827 CCDC152Q4G0S7 254 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 SPATA4Q8NEY3 305 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 TSGA10Q9BZW7 698 aa11.03□□□□□ -0.64
USP43-203ENST00000570827 CRKLP46109 303 aaKnown RBP11.02□□□□□ -0.64
USP43-203ENST00000570827 PAK2Q13177 524 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms