RNA–Protein interactions for RNA: ENST00000570773.5

ATP2A3-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 989 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-207ENST00000570773 FOXD4L3Q6VB84 417 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 MB21D1Q8N884 522 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 CUL5Q93034 780 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 GLT8D2Q9H1C3 349 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 ZNF214Q9UL59 606 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 PCDHA6Q9UN73 950 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 MRPL11Q9Y3B7 192 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 PCDHA8Q9Y5H6 950 aa17.1■□□□□ 0.33
ATP2A3-207ENST00000570773 MANSC4A6NHS7 340 aaPredicted RBP17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 OPLAHO14841 1288 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 HERVK_113P62684 666 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 DNM1Q05193 864 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 TEX2Q8IWB9 1127 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 PTPN18Q99952 460 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 PNMA3Q9UL41 463 aa17.09■□□□□ 0.33
ATP2A3-207ENST00000570773 PDHXO00330 501 aa17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 CLK2P49760 499 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 EARS2Q5JPH6 523 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 REXO1Q8N1G1 1221 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 RASGRP4Q8TDF6 673 aa17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 PTPRFP10586 1907 aa17.08■□□□□ 0.32
ATP2A3-207ENST00000570773 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 MEIS2O14770 477 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 STAT3P40763 770 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 APLP1P51693 650 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 ATL3Q6DD88 541 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 CLEC4DQ8WXI8 215 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
ATP2A3-207ENST00000570773 RLFQ13129 1914 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 PIK3CDO00329 1044 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 CNMDO75829 334 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 ALAS1P13196 640 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 INHBEP58166 350 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 KRT85P78386 507 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 UBE2SQ16763 222 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 SNRNP48Q6IEG0 339 aaKnown RBP17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 PIK3AP1Q6ZUJ8 805 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 GTF3C2Q8WUA4 911 aaPredicted RBP17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 TMEM260Q9NX78 707 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 RBPJLQ9UBG7 517 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 RIPK3Q9Y572 518 aa17.06■□□□□ 0.32
ATP2A3-207ENST00000570773 CCDC194A0A1B0GVG4 234 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 GCOM1H8Y6P7 765 aaPredicted RBP17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 POLR2MP0CAP2 368 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 CYP2C8P10632 490 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 TOB1P50616 345 aaPredicted RBP17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 GHRHRQ02643 423 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 TBC1D5Q92609 795 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 TRERF1Q96PN7 1200 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
ATP2A3-207ENST00000570773 MYH6P13533 1939 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 IGF2BP3O00425 579 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 NFIBO00712 420 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 PEX10O60683 326 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 TRAPPC10P48553 1259 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 PLS1Q14651 629 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 MUM1L1Q5H9M0 696 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 SAMD3Q8N6K7 520 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 PARK7Q99497 189 aaKnown RBP17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 PAGR1Q9BTK6 254 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 SPATC1LQ9H0A9 340 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
ATP2A3-207ENST00000570773 CFBP00751 764 aa17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 FOSP01100 380 aaPredicted RBP17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 HSD17B4P51659 736 aa17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 SREBF2Q12772 1141 aa17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 NONOQ15233 471 aaKnown RBP eCLIP17.03■□□□□ 0.32
ATP2A3-207ENST00000570773 DEFB115Q30KQ5 88 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms