RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 DDX11Q96FC9 970 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 CASS4Q9NQ75 786 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 DDX19AQ9NUU7 478 aaKnown RBP9.09□□□□□ -0.95
TCF4-246ENST00000570287 PSD3Q9NYI0 1048 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 TPX2Q9ULW0 747 aaKnown RBP9.09□□□□□ -0.95
TCF4-246ENST00000570287 V9GYY5 206 aaPredicted RBP9.09□□□□□ -0.95
TCF4-246ENST00000570287 NWD2Q9ULI1 1742 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 AKAP11Q9UKA4 1901 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 ROBO1Q9Y6N7 1651 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 A0A0G2JLW4 131 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 PTPDC1A2A3K4 754 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 FOXP2O15409 715 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 AKAP10O43572 662 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 CTDNEP1O95476 244 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 PDIA3P30101 505 aaKnown RBP9.09□□□□□ -0.95
TCF4-246ENST00000570287 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 TEX35Q5T0J7 233 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 ZNF34Q8IZ26 560 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 NUP62CLQ9H1M0 184 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 ZHX3Q9H4I2 956 aa9.09□□□□□ -0.95
TCF4-246ENST00000570287 SALL1Q9NSC2 1324 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 KCNQ2O43526 872 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 PDE8BO95263 885 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 CAVIN2O95810 425 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 SRGNP10124 158 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 LIG1P18858 919 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 GUCY2CP25092 1073 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 TPM4P67936 248 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 ATL3Q6DD88 541 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 IL31Q6EBC2 164 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 TTLL5Q6EMB2 1281 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 THNSL2Q86YJ6 484 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 E2F7Q96AV8 911 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 SYTL4Q96C24 671 aaPredicted RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 EAF1Q96JC9 268 aaPredicted RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 CITED4Q96RK1 184 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 NCAPGQ9BPX3 1015 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 STIM2Q9P246 746 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 LRP5O75197 1615 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 TBX3O15119 743 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 ATRNO75882 1429 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 MCAMP43121 646 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 CCZ1BP86790 482 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 SRLQ86TD4 932 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 CCAR2Q8N163 923 aaKnown RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 PUS7LQ9H0K6 701 aaKnown RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 ZNF358Q9NW07 568 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 RBM28Q9NW13 759 aaKnown RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 CLIP2Q9UDT6 1046 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 MYH15Q9Y2K3 1946 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 WDR19Q8NEZ3 1342 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 GOLGA6CA6NDK9 693 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 GOLGA6BA6NDN3 693 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 GPAA1O43292 621 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 CFHP08603 1231 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 UQCRFS1P1P0C7P4 283 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 GOLGA6DP0CG33 693 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 ADD2P35612 726 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 SCTRP47872 440 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 NEK3P51956 506 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 ZC3H12AQ5D1E8 599 aaKnown RBP9.08□□□□□ -0.96
TCF4-246ENST00000570287 GJD3Q8N144 294 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 TRPM4Q8TD43 1214 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 GOLGA6AQ9NYA3 693 aa9.08□□□□□ -0.96
TCF4-246ENST00000570287 MROH5Q6ZUA9 1318 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 SMAD7O15105 426 aaKnown RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 RGS20O76081 388 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 TUBB4AP04350 444 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 EIF5P55010 431 aaKnown RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 CCT2P78371 535 aaKnown RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 MB21D2Q8IYB1 491 aaPredicted RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 GOLGA5Q8TBA6 731 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 TRERF1Q96PN7 1200 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 ASPSCR1Q9BZE9 553 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 DACT1Q9NYF0 836 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.07□□□□□ -0.96
TCF4-246ENST00000570287 LCMT1Q9UIC8 334 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 UBN2Q6ZU65 1347 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 MYCLP1P12525 358 aaPredicted RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 RRM1P23921 792 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 TNNT3P45378 269 aaPredicted RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 KCNJ6P48051 423 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 GTF2A1P52655 376 aaPredicted RBP9.07□□□□□ -0.96
TCF4-246ENST00000570287 POU5F1BQ06416 359 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 UBE3CQ15386 1083 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 LONRF1Q17RB8 773 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 FBXO18Q8NFZ0 1043 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 NEK11Q8NG66 645 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 NCOA7Q8NI08 942 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 SLC39A7Q92504 469 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 SMARCE1Q969G3 411 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 PGBD1Q96JS3 809 aa9.07□□□□□ -0.96
TCF4-246ENST00000570287 MYCBPQ99417 103 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms