RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ATP6V1DQ9Y5K8 247 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 THSD7BQ9C0I4 1608 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 RLFQ13129 1914 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 PDHXO00330 501 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 GRM1Q13255 1194 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 NR5A1Q13285 461 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 MB21D1Q8N884 522 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 CUL5Q93034 780 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
HERPUD1-219ENST00000570273 FAM155AB1AL88 458 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 ALAS1P13196 640 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.425e-8■■□□□ 14.2
HERPUD1-219ENST00000570273 OAZ1P54368 228 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 SNRNP48Q6IEG0 339 aaKnown RBP17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 LBX2Q6XYB7 198 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 NOSTRINQ8IVI9 506 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 FAM43AQ8N2R8 423 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 RASGRP4Q8TDF6 673 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 PAGR1Q9BTK6 254 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 GLT8D2Q9H1C3 349 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 PSTPIP2Q9H939 334 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 A0A0G2JMZ2 1700 aa17.68■□□□□ 0.42
HERPUD1-219ENST00000570273 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 PLS1Q14651 629 aa17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 TMEM132BQ14DG7 1078 aa17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 CYP4F22Q6NT55 531 aa17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 GTF3C2Q8WUA4 911 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 TEX13BQ9BXU2 312 aa17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 HOMER2Q9NSB8 354 aa17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 ZNF214Q9UL59 606 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-219ENST00000570273 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 ADAMTS3O15072 1205 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 CYP2C8P10632 490 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 SREBF2Q12772 1141 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 UBE2SQ16763 222 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 PARK7Q99497 189 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 PTPN18Q99952 460 aa17.66■□□□□ 0.42
HERPUD1-219ENST00000570273 CCDC194A0A1B0GVG4 234 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 STAT3P40763 770 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 JAKMIP3Q5VZ66 844 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 PIK3AP1Q6ZUJ8 805 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 KRT25Q7Z3Z0 450 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 CHAMP1Q96JM3 812 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 TRERF1Q96PN7 1200 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 GBP4Q96PP9 640 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 BTBD7Q9P203 1132 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 BIN2Q9UBW5 565 aaPredicted RBP17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 PCDHA6Q9UN73 950 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 PCDHA8Q9Y5H6 950 aa17.65■□□□□ 0.42
HERPUD1-219ENST00000570273 FAM205CA6NFA0 338 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 M0R2N6 131 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 IGF2BP3O00425 579 aaKnown RBP eCLIP17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 OPLAHO14841 1288 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 CNMDO75829 334 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 DNM1Q05193 864 aaKnown RBP17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 DEFB115Q30KQ5 88 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 TKFCQ3LXA3 575 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 POTEEQ6S8J3 1075 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 ZNF396Q96N95 335 aaPredicted RBP17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 SPATC1LQ9H0A9 340 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 TMEM260Q9NX78 707 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.42
HERPUD1-219ENST00000570273 GCOM1H8Y6P7 765 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 NFIBO00712 420 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 PEX10O60683 326 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 CFBP00751 764 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 POLR2MP0CAP2 368 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 INHBEP58166 350 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 NOM1Q5C9Z4 860 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 MUM1L1Q5H9M0 696 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 EARS2Q5JPH6 523 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 MCF2L2Q86YR7 1114 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 CAPNS2Q96L46 248 aa17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 ZCCHC17Q9NP64 241 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-219ENST00000570273 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 HOXA13P31271 388 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 GCLCP48506 637 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 KRT85P78386 507 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 NOGQ13253 232 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 AP3B2Q13367 1082 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 NONOQ15233 471 aaKnown RBP eCLIP17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 IFNL1Q8IU54 200 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 RIOX2Q8IUF8 465 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 PGBD1Q96JS3 809 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 TXNRD2Q9NNW7 524 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms