RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 COL20A1Q9P218 1284 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 BAZ2BQ9UIF8 2168 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 DHX16O60231 1041 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 SGPL1O95470 568 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 TFRCP02786 760 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 CYBAP13498 195 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 GJA8P48165 433 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 UBXN2AP68543 259 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 CCDC178Q5BJE1 867 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 Q6ZUG5 572 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 DHX32Q7L7V1 743 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 UBE2Q1Q7Z7E8 422 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 HOMER1Q86YM7 354 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 ABRAQ8N0Z2 381 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 UPF3BQ9BZI7 483 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 PDGFCQ9NRA1 345 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 CYP39A1Q9NYL5 469 aa11.45□□□□□ -0.58
GTF3C1-212ENST00000570129 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 ZNF865P0CJ78 1059 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 CALML3P27482 149 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 CDC27P30260 824 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 OAZ1P54368 228 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 C8orf34Q49A92 452 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 ASPRV1Q53RT3 343 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 MFSD14CQ5VZR4 134 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 EEPD1Q7L9B9 569 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 CHST13Q8NET6 341 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 TAAR1Q96RJ0 339 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 TINF2Q9BSI4 451 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 KATNBL1Q9H079 304 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 ACAD9Q9H845 621 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
GTF3C1-212ENST00000570129 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 ERICH2A1L162 156 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 CASTP20810 708 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 RPS6KB1P23443 525 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 RPS6P62753 249 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 FUT2Q10981 343 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 TOB2Q14106 344 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 MICU3Q86XE3 530 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 BRF1Q92994 677 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 PAWRQ96IZ0 340 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 TMEM87BQ96K49 555 aa11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 NCOA5Q9HCD5 579 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 ZNFX1Q9P2E3 1918 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-212ENST00000570129 KLF18A0A0U1RQI7 1052 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 PTPDC1A2A3K4 754 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 MYADML2A6NDP7 307 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 CCDC69A6NI79 296 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 PGK1P00558 417 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 HOXA13P31271 388 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 LIFRP42702 1097 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 MLLT1Q03111 559 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 RNF20Q5VTR2 975 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 APOA5Q6Q788 366 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 ARMCX2Q7L311 632 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 SYTL5Q8TDW5 730 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 NAP1L2Q9ULW6 460 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
GTF3C1-212ENST00000570129 REC8O95072 547 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 FDX1P10109 184 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 SART3Q15020 963 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 BLOC1S2Q6QNY1 142 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 MAMDC4Q6UXC1 1216 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 TMTC3Q6ZXV5 915 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 IL31RAQ8NI17 732 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 GPKOWQ92917 476 aaPredicted RBP eCLIP11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 DDX20Q9UHI6 824 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
GTF3C1-212ENST00000570129 ZBTB5O15062 677 aa11.4□□□□□ -0.58
GTF3C1-212ENST00000570129 DDAH1O94760 285 aa11.4□□□□□ -0.58
GTF3C1-212ENST00000570129 FARP2O94887 1054 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-212ENST00000570129 ADCYAP1R1P41586 468 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms