RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
CNOT1-218ENST00000569732 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
CNOT1-218ENST00000569732 LAMA2P24043 3122 aaKnown RBP8.62□□□□□ -1.03
CNOT1-218ENST00000569732 M0R2N6 131 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 CCND3P30281 292 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-218ENST00000569732 SLC19A1P41440 591 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 ERVK-24P63145 666 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 NUCB1Q02818 461 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 GPR142Q7Z601 462 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 PLEKHH3Q7Z736 793 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
CNOT1-218ENST00000569732 EMID1Q96A84 441 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-218ENST00000569732 P2RX7Q99572 595 aaKnown RBP8.61□□□□□ -1.03
CNOT1-218ENST00000569732 CCDC8Q9H0W5 538 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-218ENST00000569732 DHX36Q9H2U1 1008 aaKnown RBP8.61□□□□□ -1.03
CNOT1-218ENST00000569732 PI4KBQ9UBF8 816 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 LTBP2Q14767 1821 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 DOCK3Q8IZD9 2030 aa8.61□□□□□ -1.03
CNOT1-218ENST00000569732 DNAH12Q6ZR08 3092 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 DNM1LO00429 736 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 WNT7AO00755 349 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 LGR5O75473 907 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 GLRX3O76003 335 aaKnown RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 ADH1CP00326 375 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 NEFLP07196 543 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 SMAD3P84022 425 aaKnown RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 NR5A1Q13285 461 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 OCLNQ16625 522 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CCL14Q16627 93 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 MFSD14CQ5VZR4 134 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 AACSQ86V21 672 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CCDC116Q8IYX3 515 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 TSEN2Q8NCE0 465 aaKnown RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 MAFAQ8NHW3 353 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 OTUD7AQ8TE49 926 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 LPAR1Q92633 364 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 NSUN4Q96CB9 384 aaKnown RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 ZNF512BQ96KM6 892 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CDX2Q99626 313 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 SENP6Q9GZR1 1112 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 TXNRD2Q9NNW7 524 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CYLDQ9NQC7 956 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 RBPJLQ9UBG7 517 aa8.6□□□□□ -1.03
CNOT1-218ENST00000569732 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
CNOT1-218ENST00000569732 CDH23Q9H251 3354 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 SCNN1AP37088 669 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 CCNA1P78396 465 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 RRP1BQ14684 758 aaKnown RBP8.59□□□□□ -1.03
CNOT1-218ENST00000569732 TAS1R3Q7RTX0 852 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 CLASRPQ8N2M8 674 aaKnown RBP8.59□□□□□ -1.03
CNOT1-218ENST00000569732 ZNF384Q8TF68 577 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 EDC3Q96F86 508 aaKnown RBP8.59□□□□□ -1.03
CNOT1-218ENST00000569732 NEUROD6Q96NK8 337 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 NOL10Q9BSC4 688 aaKnown RBP8.59□□□□□ -1.03
CNOT1-218ENST00000569732 PORCNQ9H237 461 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 SEMA6BQ9H3T3 888 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 ZNF358Q9NW07 568 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 PRUNE2Q8WUY3 3088 aa8.59□□□□□ -1.03
CNOT1-218ENST00000569732 CUL9Q8IWT3 2517 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 TMEM229AB2RXF0 380 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 IGSF3O75054 1194 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 WEE1P30291 646 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 MCAMP43121 646 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 SERPINB4P48594 390 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 PPP1R26Q5T8A7 1209 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-218ENST00000569732 ANKRD45Q5TZF3 282 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 PI16Q6UXB8 463 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 METTL16Q86W50 562 aaKnown RBP8.58□□□□□ -1.04
CNOT1-218ENST00000569732 CHD1LQ86WJ1 897 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 FOXP4Q8IVH2 680 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-218ENST00000569732 TEX11Q8IYF3 940 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.58□□□□□ -1.04
CNOT1-218ENST00000569732 MRGPRX2Q96LB1 330 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 C12orf42Q96LP6 360 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 PAGR1Q9BTK6 254 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 PPP4R2Q9NY27 417 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 RABGAP1Q9Y3P9 1069 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 SIPA1L1O43166 1804 aa8.58□□□□□ -1.04
CNOT1-218ENST00000569732 MUC3AQ02505 3323 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 SLC15A5A6NIM6 579 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 BACH1O14867 736 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 BAG3O95817 575 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 HOXC6P09630 235 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 UQCRFS1P1P0C7P4 283 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 FOSL2P15408 326 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 GDF10P55107 478 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 RTP1P59025 263 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 SHHQ15465 462 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 TSHZ3Q63HK5 1081 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 CENPQQ7L2Z9 268 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-218ENST00000569732 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-218ENST00000569732 ARRDC4Q8NCT1 418 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 PI4K2BQ8TCG2 481 aa8.57□□□□□ -1.04
CNOT1-218ENST00000569732 LNPKQ9C0E8 428 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms