RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 RAD9BQ6WBX8 426 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 KRT27Q7Z3Y8 459 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 NLGN1Q8N2Q7 840 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 LRRN4CLQ8ND94 238 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 WDR24Q96S15 920 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 DDX4Q9NQI0 724 aaKnown RBP10.85□□□□□ -0.67
TCF4-240ENST00000568673 TAB2Q9NYJ8 693 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 OGFRQ9NZT2 677 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 SWAP70Q9UH65 585 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 SERPINB13Q9UIV8 391 aa10.85□□□□□ -0.67
TCF4-240ENST00000568673 PSMA7O14818 248 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 TTLL1O95922 423 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 ALDH1B1P30837 517 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 TECP42680 631 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 MAP3K9P80192 1104 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 FBXO38Q6PIJ6 1188 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 TMTC1Q8IUR5 882 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 CREBRFQ8IUR6 639 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 TRIM9Q9C026 710 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 MRPL44Q9H9J2 332 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 USP40Q9NVE5 1235 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 DDX41Q9UJV9 622 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 FRMPD2Q68DX3 1309 aaPredicted RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 MYO3BQ8WXR4 1341 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 NPR1P16066 1061 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 EEF1GP26641 437 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 HSPA1LP34931 641 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 PMS1P54277 932 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 AMPD3Q01432 767 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 UBXN1Q04323 297 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 HHIPL2Q6UWX4 724 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 DPP8Q6V1X1 898 aaPredicted RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 LRRC47Q8N1G4 583 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 CCDC47Q96A33 483 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 MTMR9Q96QG7 549 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 GTPBP4Q9BZE4 634 aaKnown RBP10.84□□□□□ -0.67
TCF4-240ENST00000568673 THAP9Q9H5L6 903 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 ABHD10Q9NUJ1 306 aa10.84□□□□□ -0.67
TCF4-240ENST00000568673 MNS1Q8NEH6 495 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 NOC3LQ8WTT2 800 aaKnown RBP10.83□□□□□ -0.68
TCF4-240ENST00000568673 UBXN4Q92575 508 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 KIFC2Q96AC6 838 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 COA7Q96BR5 231 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 MMTAG2Q9BU76 263 aaKnown RBP10.83□□□□□ -0.68
TCF4-240ENST00000568673 TMEM260Q9NX78 707 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 EFCAB8A8MWE9 144 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 H2AFXP16104 143 aaPredicted RBP10.83□□□□□ -0.68
TCF4-240ENST00000568673 SHMT1P34896 483 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 PPP1R2P41236 205 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 ADCY7P51828 1080 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 EIF6P56537 245 aaKnown RBP10.83□□□□□ -0.68
TCF4-240ENST00000568673 ZNF543Q08ER8 600 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 TTI2Q6NXR4 508 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 CDC42EP5Q6NZY7 148 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
TCF4-240ENST00000568673 CALML4Q96GE6 196 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 NUP88Q99567 741 aaPredicted RBP10.83□□□□□ -0.68
TCF4-240ENST00000568673 JMJD4Q9H9V9 463 aa10.83□□□□□ -0.68
TCF4-240ENST00000568673 A0A1W2PQC6 194 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 RNF225M0QZC1 329 aaPredicted RBP10.82□□□□□ -0.68
TCF4-240ENST00000568673 TADA3O75528 432 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 TXKP42681 527 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
TCF4-240ENST00000568673 SCNN1DP51172 638 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 PDE4DQ08499 809 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 CALCRLQ16602 461 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 DOK7Q18PE1 504 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 APOBEC3HQ6NTF7 200 aaKnown RBP10.82□□□□□ -0.68
TCF4-240ENST00000568673 PPP1R18Q6NYC8 613 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 CYP26C1Q6V0L0 522 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 ZNF507Q8TCN5 953 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 TEKT1Q969V4 418 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 MXD3Q9BW11 206 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 CARD6Q9BX69 1037 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 TMX4Q9H1E5 349 aaPredicted RBP10.82□□□□□ -0.68
TCF4-240ENST00000568673 GPCPD1Q9NPB8 672 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 LZTFL1Q9NQ48 299 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 MRFAP1Q9Y605 127 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 ANKRD31Q8N7Z5 1873 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 BICDL2A1A5D9 508 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 LGALS16A8MUM7 142 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 EDIL3O43854 480 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 CCNE1P24864 410 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 KRT9P35527 623 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 PDE6BP35913 854 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 ASIC1P78348 528 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 STK4Q13043 487 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 PDIA5Q14554 519 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 ARHGAP29Q52LW3 1261 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 COBLL1Q53SF7 1204 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 GPATCH4Q5T3I0 446 aaKnown RBP10.82□□□□□ -0.68
TCF4-240ENST00000568673 ADGRF4Q8IZF3 695 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 MB21D1Q8N884 522 aa10.82□□□□□ -0.68
TCF4-240ENST00000568673 IRX2Q9BZI1 471 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms