RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 FGD4Q96M96 766 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 MEIS3Q99687 375 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 DBNDD2Q9BQY9 259 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 KATNBL1Q9H079 304 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 IRF2BPLQ9H1B7 796 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 SWAP70Q9UH65 585 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 CTNNA3Q9UI47 895 aa11.58□□□□□ -0.56
KARS-209ENST00000568378 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
KARS-209ENST00000568378 TMEM221A6NGB7 291 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 M0R296 226 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 PTGS1P23219 599 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 WDR5P61964 334 aaKnown RBP11.57□□□□□ -0.56
KARS-209ENST00000568378 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 BMP8AQ7Z5Y6 402 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
KARS-209ENST00000568378 EDAQ92838 391 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 PABPC5Q96DU9 382 aaKnown RBP11.57□□□□□ -0.56
KARS-209ENST00000568378 RAD9AQ99638 391 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
KARS-209ENST00000568378 FBXO40Q9UH90 709 aa11.57□□□□□ -0.56
KARS-209ENST00000568378 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 ZBED4O75132 1171 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 EEF2P13639 858 aaKnown RBP11.56□□□□□ -0.56
KARS-209ENST00000568378 SMPD1P17405 629 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 DEFB103AP81534 67 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 BFSP2Q13515 415 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 RNF135Q8IUD6 432 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 MRPL38Q96DV4 380 aaKnown RBP11.56□□□□□ -0.56
KARS-209ENST00000568378 DYNLL2Q96FJ2 89 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 TANC1Q9C0D5 1861 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 POLR3EQ9NVU0 708 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 MYH8P13535 1937 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 C5orf42Q9H799 3197 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 SIP14410 1827 aa11.56□□□□□ -0.56
KARS-209ENST00000568378 PTPRSQ13332 1948 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 ASB14A6NK59 587 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 GJB5O95377 273 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 MYL3P08590 195 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 CYP2D6P10635 497 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 CNTN2Q02246 1040 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 MTX1Q13505 466 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 FAM117BQ6P1L5 589 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 TRIM67Q6ZTA4 783 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 FBXL6Q8N531 539 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 ZNF512BQ96KM6 892 aaPredicted RBP11.55□□□□□ -0.56
KARS-209ENST00000568378 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 NUP88Q99567 741 aaPredicted RBP11.55□□□□□ -0.56
KARS-209ENST00000568378 RIOK1Q9BRS2 568 aaKnown RBP11.55□□□□□ -0.56
KARS-209ENST00000568378 RAVER2Q9HCJ3 691 aaKnown RBP11.55□□□□□ -0.56
KARS-209ENST00000568378 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
KARS-209ENST00000568378 CLDND1Q9NY35 253 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 Q9Y3F1 56 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 TECTAO75443 2155 aa11.55□□□□□ -0.56
KARS-209ENST00000568378 ATP2A1O14983 1001 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 GNAI3P08754 354 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 ID4P47928 161 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 OS9Q13438 667 aaPredicted RBP11.54□□□□□ -0.56
KARS-209ENST00000568378 CLUL1Q15846 466 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
KARS-209ENST00000568378 TCEAL5Q5H9L2 206 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 IQSEC1Q6DN90 963 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
KARS-209ENST00000568378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
KARS-209ENST00000568378 EEPD1Q7L9B9 569 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
KARS-209ENST00000568378 C17orf80Q9BSJ5 609 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 PDGFCQ9NRA1 345 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 HOMER2Q9NSB8 354 aa11.54□□□□□ -0.56
KARS-209ENST00000568378 PTPRZ1P23471 2315 aaPredicted RBP11.54□□□□□ -0.56
KARS-209ENST00000568378 TRIOO75962 3097 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 CNKSR3Q6P9H4 555 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 FBXO16Q8IX29 292 aaPredicted RBP11.53□□□□□ -0.56
KARS-209ENST00000568378 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 SDR42E1Q8WUS8 393 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 MTG1Q9BT17 334 aaPredicted RBP11.53□□□□□ -0.56
KARS-209ENST00000568378 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
KARS-209ENST00000568378 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
KARS-209ENST00000568378 USP17L12C9JPN9 530 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 USP17L21D6R901 530 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 STXBP3O00186 592 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 CPT1AP50416 773 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
KARS-209ENST00000568378 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
KARS-209ENST00000568378 NBPF20Q3BBV1 942 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 ASCL5Q7RTU5 278 aa11.52□□□□□ -0.57
KARS-209ENST00000568378 RPAINQ86UA6 219 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms