RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 ANKRD33Q7Z3H0 272 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
CDR2-206ENST00000567406 CYP39A1Q9NYL5 469 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 CCPG1Q9ULG6 757 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 FGRP09769 529 aa18.04■□□□□ 0.48
CDR2-206ENST00000567406 CST5P28325 142 aaPredicted RBP18.04■□□□□ 0.48
CDR2-206ENST00000567406 TNFAIP2Q03169 654 aa18.04■□□□□ 0.48
CDR2-206ENST00000567406 PPP4R3BQ5MIZ7 849 aa18.04■□□□□ 0.48
CDR2-206ENST00000567406 ZNF697Q5TEC3 545 aa18.04■□□□□ 0.48
CDR2-206ENST00000567406 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
CDR2-206ENST00000567406 RNPC3Q96LT9 517 aaKnown RBP18.04■□□□□ 0.48
CDR2-206ENST00000567406 GLT1D1Q96MS3 346 aa18.04■□□□□ 0.48
CDR2-206ENST00000567406 SPC25Q9HBM1 224 aa18.04■□□□□ 0.48
CDR2-206ENST00000567406 CDK7P50613 346 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 FPGSQ05932 587 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 TKFCQ3LXA3 575 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 TBC1D10CQ8IV04 446 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 FBXO16Q8IX29 292 aaPredicted RBP18.03■□□□□ 0.48
CDR2-206ENST00000567406 PCSK9Q8NBP7 692 aaKnown RBP18.03■□□□□ 0.48
CDR2-206ENST00000567406 DCAF4Q8WV16 495 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 TOX2Q96NM4 488 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 SEMA6BQ9H3T3 888 aa18.03■□□□□ 0.48
CDR2-206ENST00000567406 PRUNE2Q8WUY3 3088 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 CCDC171Q6TFL3 1326 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 ASB14A6NK59 587 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 DYNC1LI2O43237 492 aaPredicted RBP18.02■□□□□ 0.48
CDR2-206ENST00000567406 TOP1P11387 765 aaKnown RBP18.02■□□□□ 0.48
CDR2-206ENST00000567406 SMPD1P17405 629 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 SYDE2Q5VT97 1194 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 CXCL17Q6UXB2 119 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 EXOC6Q8TAG9 804 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 CDX2Q99626 313 aaPredicted RBP18.02■□□□□ 0.48
CDR2-206ENST00000567406 ZKSCAN3Q9BRR0 538 aa18.02■□□□□ 0.48
CDR2-206ENST00000567406 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.48
CDR2-206ENST00000567406 TTYH1Q9H313 450 aaPredicted RBP18.02■□□□□ 0.48
CDR2-206ENST00000567406 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
CDR2-206ENST00000567406 ELP1O95163 1332 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
CDR2-206ENST00000567406 ARVCFO00192 962 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 NFIBO00712 420 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 TIMP1P01033 207 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 ICAM1P05362 532 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 SDSP20132 328 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 BAATQ14032 418 aaPredicted RBP18.01■□□□□ 0.47
CDR2-206ENST00000567406 TAPT1Q6NXT6 567 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 TLK2Q86UE8 772 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 PLEKHM2Q8IWE5 1019 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
CDR2-206ENST00000567406 TBX21Q9UL17 535 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 LCTP09848 1927 aa18.01■□□□□ 0.47
CDR2-206ENST00000567406 PDHBP11177 359 aa18■□□□□ 0.47
CDR2-206ENST00000567406 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
CDR2-206ENST00000567406 AKNAD1Q5T1N1 836 aa18■□□□□ 0.47
CDR2-206ENST00000567406 BTNL9Q6UXG8 535 aa18■□□□□ 0.47
CDR2-206ENST00000567406 MFSD6Q6ZSS7 791 aa18■□□□□ 0.47
CDR2-206ENST00000567406 CHD1LQ86WJ1 897 aa18■□□□□ 0.47
CDR2-206ENST00000567406 SMC5Q8IY18 1101 aa18■□□□□ 0.47
CDR2-206ENST00000567406 MYLIPQ8WY64 445 aa18■□□□□ 0.47
CDR2-206ENST00000567406 CPVLQ9H3G5 476 aa18■□□□□ 0.47
CDR2-206ENST00000567406 TCP11L1Q9NUJ3 509 aa18■□□□□ 0.47
CDR2-206ENST00000567406 NEDD4P46934 1319 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 PTPDC1A2A3K4 754 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 GOLGA8HP0CJ92 632 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 ACRP10323 421 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 CSF2RAP15509 400 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 PSMC6P62333 389 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 CWC27Q6UX04 472 aaKnown RBP17.99■□□□□ 0.47
CDR2-206ENST00000567406 SLC30A10Q6XR72 485 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 KIAA1211Q6ZU35 1233 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 C16orf59Q7L2K0 433 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.472e-16■□□□□ 8
CDR2-206ENST00000567406 AP5M1Q9H0R1 490 aa17.99■□□□□ 0.47
CDR2-206ENST00000567406 CALML3P27482 149 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 CYP2C18P33260 490 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 NUCB1Q02818 461 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 FSCN1Q16658 493 aaKnown RBP17.98■□□□□ 0.47
CDR2-206ENST00000567406 MFSD5Q6N075 450 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 CLEC4DQ8WXI8 215 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 GRIN2DO15399 1336 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 MROH7Q68CQ1 1323 aa17.98■□□□□ 0.47
CDR2-206ENST00000567406 VCANP13611 3396 aa17.97■□□□□ 0.47
CDR2-206ENST00000567406 ALDH5A1P51649 535 aaPredicted RBP17.97■□□□□ 0.47
CDR2-206ENST00000567406 NKX3-2P78367 333 aa17.97■□□□□ 0.47
CDR2-206ENST00000567406 ZNF543Q08ER8 600 aa17.97■□□□□ 0.47
CDR2-206ENST00000567406 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
CDR2-206ENST00000567406 ZMYM6O95789 1325 aa17.97■□□□□ 0.47
CDR2-206ENST00000567406 UMODL1Q5DID0 1318 aa17.97■□□□□ 0.47
CDR2-206ENST00000567406 GRXCR1A8MXD5 290 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 ZNF213O14771 459 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 CD4P01730 458 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 ITGA7Q13683 1181 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 TMEM240Q5SV17 173 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 PPP1R13LQ8WUF5 828 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 TRPV6Q9H1D0 765 aa17.96■□□□□ 0.47
CDR2-206ENST00000567406 CUL9Q8IWT3 2517 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms