RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 MAPK8IP1Q9UQF2 711 aa27.81■■■□□ 2.04
FANCA-221ENST00000566889 PCDHA13Q9Y5I0 950 aa27.81■■■□□ 2.04
FANCA-221ENST00000566889 TRIM49BA6NDI0 452 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 ITGB3BPQ13352 177 aaPredicted RBP27.8■■■□□ 2.04
FANCA-221ENST00000566889 FMNL3Q8IVF7 1028 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 WHAMMQ8TF30 809 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 NUP133Q8WUM0 1156 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 SGSM3Q96HU1 749 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 TRIM47Q96LD4 638 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 TUBGCP2Q9BSJ2 902 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 RASSF10A6NK89 507 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 E7EVH7 732 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 PSMA7O14818 248 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 ZNF263O14978 683 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 HNRNPH3P31942 346 aaKnown RBP27.8■■■□□ 2.04
FANCA-221ENST00000566889 SLC8A1P32418 973 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 TBC1D8BQ0IIM8 1120 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 NFRKBQ6P4R8 1299 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 CYB5D1Q6P9G0 228 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 SHISA4Q96DD7 197 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 TACC3Q9Y6A5 838 aa27.8■■■□□ 2.04
FANCA-221ENST00000566889 MYH6P13533 1939 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 LCA5LO95447 670 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 CALRP27797 417 aaKnown RBP27.79■■■□□ 2.04
FANCA-221ENST00000566889 SEC24CP53992 1094 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 FUKQ8N0W3 1084 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 PIK3R5Q8WYR1 880 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 CYFIP2Q96F07 1278 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 GLI3P10071 1580 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 RTL9Q8NET4 1388 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 A0A1B0GUA9 196 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 PRPF3O43395 683 aaKnown RBP27.79■■■□□ 2.04
FANCA-221ENST00000566889 TRAPPC10P48553 1259 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 PKN1Q16512 942 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 CFAP221Q4G0U5 840 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 SMCR8Q8TEV9 937 aaPredicted RBP27.79■■■□□ 2.04
FANCA-221ENST00000566889 TNFRSF25Q93038 417 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 FAM212AQ96EL1 285 aa27.79■■■□□ 2.04
FANCA-221ENST00000566889 MOCS3O95396 460 aa27.78■■■□□ 2.04
FANCA-221ENST00000566889 TCIRG1Q13488 830 aa27.78■■■□□ 2.04
FANCA-221ENST00000566889 FAM114A1Q8IWE2 563 aa27.78■■■□□ 2.04
FANCA-221ENST00000566889 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.78■■■□□ 2.04
FANCA-221ENST00000566889 P3H4Q92791 437 aa27.78■■■□□ 2.04
FANCA-221ENST00000566889 RBM12Q9NTZ6 932 aaKnown RBP27.78■■■□□ 2.04
FANCA-221ENST00000566889 DDX20Q9UHI6 824 aaKnown RBP27.78■■■□□ 2.04
FANCA-221ENST00000566889 RIC1Q4ADV7 1423 aa27.78■■■□□ 2.04
FANCA-221ENST00000566889 WNT7AO00755 349 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 MYL1P05976 194 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 ZKSCAN3Q9BRR0 538 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 ATP6V0A4Q9HBG4 840 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 NFU1Q9UMS0 254 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 CARSP49589 748 aaKnown RBP27.77■■■□□ 2.04
FANCA-221ENST00000566889 PMS1P54277 932 aaKnown RBP27.77■■■□□ 2.04
FANCA-221ENST00000566889 MRPS25P82663 173 aaKnown RBP27.77■■■□□ 2.04
FANCA-221ENST00000566889 IFIT5Q13325 482 aaKnown RBP27.77■■■□□ 2.04
FANCA-221ENST00000566889 RRP12Q5JTH9 1297 aaKnown RBP27.77■■■□□ 2.04
FANCA-221ENST00000566889 METTL24Q5JXM2 366 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 LRCH2Q5VUJ6 765 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 ERGIC2Q96RQ1 377 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 MLXIPQ9HAP2 919 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 PLAGL2Q9UPG8 496 aa27.77■■■□□ 2.04
FANCA-221ENST00000566889 GOLGA6L10A6NI86 522 aa27.76■■■□□ 2.04
FANCA-221ENST00000566889 TTI2Q6NXR4 508 aa27.76■■■□□ 2.04
FANCA-221ENST00000566889 LRIG3Q6UXM1 1119 aa27.76■■■□□ 2.04
FANCA-221ENST00000566889 ARMC9Q7Z3E5 817 aa27.76■■■□□ 2.04
FANCA-221ENST00000566889 FAXDC2Q96IV6 333 aa27.76■■■□□ 2.04
FANCA-221ENST00000566889 RNF41Q9H4P4 317 aaPredicted RBP27.76■■■□□ 2.04
FANCA-221ENST00000566889 GMNCA6NCL1 334 aa27.76■■■□□ 2.03
FANCA-221ENST00000566889 KIF3CO14782 793 aa27.76■■■□□ 2.03
FANCA-221ENST00000566889 LONP1P36776 959 aaKnown RBP27.76■■■□□ 2.03
FANCA-221ENST00000566889 CEP57Q86XR8 500 aa27.76■■■□□ 2.03
FANCA-221ENST00000566889 DHTKD1Q96HY7 919 aaPredicted RBP27.76■■■□□ 2.03
FANCA-221ENST00000566889 PCMTD1Q96MG8 357 aaPredicted RBP27.76■■■□□ 2.03
FANCA-221ENST00000566889 PLA2G12BQ9BX93 195 aa27.76■■■□□ 2.03
FANCA-221ENST00000566889 PJA2O43164 708 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 ARL6IP4Q66PJ3 421 aaKnown RBP27.75■■■□□ 2.03
FANCA-221ENST00000566889 EPB41L5Q9HCM4 733 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 HEXIM1O94992 359 aaKnown RBP27.75■■■□□ 2.03
FANCA-221ENST00000566889 GLI1P08151 1106 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 FAM153BP0C7A2 387 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 UQCRFS1P1P0C7P4 283 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 FAM153CQ494X1 144 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 LACTB2Q53H82 288 aaPredicted RBP27.75■■■□□ 2.03
FANCA-221ENST00000566889 ESCO1Q5FWF5 840 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 KRT26Q7Z3Y9 468 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 UBAC1Q9BSL1 405 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 NACAP1Q9BZK3 213 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 TMBIM4Q9HC24 238 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 FAM153AQ9UHL3 310 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 RIPOR2Q9Y4F9 1068 aa27.75■■■□□ 2.03
FANCA-221ENST00000566889 CSF1RP07333 972 aa27.74■■■□□ 2.03
FANCA-221ENST00000566889 STAT6P42226 847 aa27.74■■■□□ 2.03
FANCA-221ENST00000566889 ANKRD20A8PQ5CZ79 823 aa27.74■■■□□ 2.03
FANCA-221ENST00000566889 ZBTB3Q9H5J0 574 aa27.74■■■□□ 2.03
FANCA-221ENST00000566889 GNAT2P19087 354 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 ARID4AP29374 1257 aaPredicted RBP27.73■■■□□ 2.03
FANCA-221ENST00000566889 CXCR5P32302 372 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 KIF11P52732 1056 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 CABP4P57796 275 aa27.73■■■□□ 2.03
FANCA-221ENST00000566889 NBPF9Q3BBW0 867 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms