RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ME1P48163 572 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ZBED6P86452 979 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 FAPQ12884 760 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCDC65Q8IXS2 484 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 MAIP1Q8WWC4 291 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 TBC1D31Q96DN5 1066 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 RBM41Q96IZ5 413 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 PPCSQ9HAB8 311 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 SEPT10Q9P0V9 454 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 WDR35Q9P2L0 1181 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 C2CD2Q9Y426 696 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 TMEM221A6NGB7 291 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CYP27B1O15528 508 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 NQO1P15559 274 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 CD44P16070 742 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 FXR1P51114 621 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R42Q7Z4L9 355 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 FOXP4Q8IVH2 680 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 AIDAQ96BJ3 306 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ZNF510Q9Y2H8 683 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 L3MBTL1Q9Y468 752 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ZNF233A6NK53 670 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 PRPF3O43395 683 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 A1BGP04217 495 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 G3BP1Q13283 466 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCDC92Q53HC0 331 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 WAPLQ7Z5K2 1190 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCDC63Q8NA47 563 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 PRDM16Q9HAZ2 1276 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ABCC12Q96J65 1359 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 MLH3Q9UHC1 1453 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 LMO7Q8WWI1 1683 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 PAPOLAP51003 745 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCNG1P51959 295 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CUL3Q13618 768 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCDC125Q86Z20 511 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCT6BQ92526 530 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 GFM2Q969S9 779 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 IQSEC3Q9UPP2 1182 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 BCL9O00512 1426 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 ACTN4O43707 911 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 FLOT1O75955 427 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 RFC1P35251 1148 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 ATP1A2P50993 1020 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 HERVK_113P62684 666 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 HDLBPQ00341 1268 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 PAK2Q13177 524 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 GET4Q7L5D6 327 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 RMI1Q9H9A7 625 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 TMOD4Q9NZQ9 345 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 SLC12A4Q9UP95 1085 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 BTG3Q14201 252 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 LSM14AQ8ND56 463 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 RAPGEF5Q92565 580 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 EVI5LQ96CN4 794 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 GDAP1L1Q96MZ0 367 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 FBXO2Q9UK22 296 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 RPH3AQ9Y2J0 694 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 NOC2LQ9Y3T9 749 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 SETBP1Q9Y6X0 1596 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 A0A1B0GVG6 124 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 NR1D1P20393 614 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 PSMC4P43686 418 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 SLC9C2Q5TAH2 1124 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 SPATA1Q5VX52 437 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 KRT40Q6A162 431 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 HIBCHQ6NVY1 386 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 OSBPL1AQ9BXW6 950 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 UGGT1Q9NYU2 1555 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 H3BQV1 296 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 HGSO14964 777 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 SURF6O75683 361 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 UBTFL1P0CB47 393 aaPredicted RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 CCDC178Q5BJE1 867 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 IFFO2Q5TF58 517 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 IZUMO3Q5VZ72 239 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 OR52E8Q6IFG1 317 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 FLCNQ8NFG4 579 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 RBM17Q96I25 401 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 TRAIPQ9BWF2 469 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 LACRTQ9GZZ8 138 aa3.21□□□□□ -1.9
CHD9-218ENST00000566029 TARBP1Q13395 1621 aaKnown RBP3.21□□□□□ -1.9
CHD9-218ENST00000566029 FAM83GA6ND36 823 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 ANP32DO95626 131 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 PSMD7P51665 324 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 IQCEQ6IPM2 695 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 TRMT44Q8IYL2 757 aaKnown RBP3.2□□□□□ -1.9
CHD9-218ENST00000566029 SPICE1Q8N0Z3 855 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 LINS1Q8NG48 757 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.2□□□□□ -1.9
CHD9-218ENST00000566029 HDAC7Q8WUI4 952 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 TLCD1Q96CP7 247 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 POLD4Q9HCU8 107 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 HDAC6Q9UBN7 1215 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 CARMIL3Q8ND23 1372 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 CCDC57Q2TAC2 916 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 ELMSAN1Q6PJG2 1045 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 ZNF662Q6ZS27 426 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 CEP128Q6ZU80 1094 aa3.2□□□□□ -1.9
CHD9-218ENST00000566029 DPH6Q7L8W6 267 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms