RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 WNK4Q96J92 1243 aa21.45■■□□□ 1.02
COMMD4-213ENST00000565834 BIN2Q9UBW5 565 aaPredicted RBP21.45■■□□□ 1.02
COMMD4-213ENST00000565834 VWA5AO00534 786 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 KIF3CO14782 793 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 YEATS4O95619 227 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 TAL1P17542 331 aaPredicted RBP21.44■■□□□ 1.02
COMMD4-213ENST00000565834 NASPP49321 788 aaPredicted RBP21.44■■□□□ 1.02
COMMD4-213ENST00000565834 FASTKD5Q7L8L6 764 aaKnown RBP21.44■■□□□ 1.02
COMMD4-213ENST00000565834 RCOR1Q9UKL0 485 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 CCPG1Q9ULG6 757 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 ZNF536O15090 1300 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 ABCB11O95342 1321 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 TRAPPC10P48553 1259 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 STK38Q15208 465 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 SF3A1Q15459 793 aaKnown RBP21.44■■□□□ 1.02
COMMD4-213ENST00000565834 JAKMIP3Q5VZ66 844 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 HOXC10Q9NYD6 342 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 PNMA2Q9UL42 364 aa21.44■■□□□ 1.02
COMMD4-213ENST00000565834 MRPL11Q9Y3B7 192 aaKnown RBP21.44■■□□□ 1.02
COMMD4-213ENST00000565834 ATP2B1P20020 1258 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 HOXA7P31268 230 aaPredicted RBP21.43■■□□□ 1.02
COMMD4-213ENST00000565834 NONOQ15233 471 aaKnown RBP eCLIP21.43■■□□□ 1.02
COMMD4-213ENST00000565834 UBE2SQ16763 222 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 CPXCR1Q8N123 301 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 LINC00301Q8NCQ3 95 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 AGBL1Q96MI9 1066 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 TMEM260Q9NX78 707 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 ADAMTS5Q9UNA0 930 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 AGTPBP1Q9UPW5 1226 aa21.43■■□□□ 1.02
COMMD4-213ENST00000565834 PASKQ96RG2 1323 aa21.42■■□□□ 1.02
COMMD4-213ENST00000565834 CLK2P49760 499 aaKnown RBP21.42■■□□□ 1.02
COMMD4-213ENST00000565834 HUNKP57058 714 aa21.42■■□□□ 1.02
COMMD4-213ENST00000565834 SMC1BQ8NDV3 1235 aa21.42■■□□□ 1.02
COMMD4-213ENST00000565834 RAVER2Q9HCJ3 691 aaKnown RBP21.42■■□□□ 1.02
COMMD4-213ENST00000565834 SPDYE16A6NNV3 312 aaPredicted RBP21.41■■□□□ 1.02
COMMD4-213ENST00000565834 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
COMMD4-213ENST00000565834 MOGSQ13724 837 aa21.41■■□□□ 1.02
COMMD4-213ENST00000565834 TTC38Q5R3I4 469 aa21.41■■□□□ 1.02
COMMD4-213ENST00000565834 TEX2Q8IWB9 1127 aa21.41■■□□□ 1.02
COMMD4-213ENST00000565834 KCNG4Q8TDN1 519 aa21.41■■□□□ 1.02
COMMD4-213ENST00000565834 PCDHB6Q9Y5E3 794 aa21.41■■□□□ 1.02
COMMD4-213ENST00000565834 RBBP6Q7Z6E9 1792 aaKnown RBP21.41■■□□□ 1.02
COMMD4-213ENST00000565834 OPLAHO14841 1288 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 GTF2A2P52657 109 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 OAZ1P54368 228 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 UBE2HP62256 183 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 PABPC4Q13310 644 aaKnown RBP eCLIP21.4■■□□□ 1.022e-10■■□□□ 11.8
COMMD4-213ENST00000565834 SLC39A14Q15043 492 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 INF2Q27J81 1249 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 USP17L6PQ6QN14 398 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 CEP131Q9UPN4 1083 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 A0A0G2JMZ2 1700 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 MEIS2O14770 477 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 SPTLC2O15270 562 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
COMMD4-213ENST00000565834 ZBTB48P10074 688 aaPredicted RBP21.4■■□□□ 1.02
COMMD4-213ENST00000565834 CETPP11597 493 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 YY1P25490 414 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 PTPAQ15257 358 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 SKOR2Q2VWA4 1001 aaPredicted RBP21.4■■□□□ 1.02
COMMD4-213ENST00000565834 MCTP2Q6DN12 878 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 REPS2Q8NFH8 660 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 MYH7BA7E2Y1 1941 aa21.4■■□□□ 1.02
COMMD4-213ENST00000565834 GOLGA6L4A6NEF3 574 aa21.39■■□□□ 1.01
COMMD4-213ENST00000565834 ALAS1P13196 640 aa21.39■■□□□ 1.01
COMMD4-213ENST00000565834 ME1P48163 572 aa21.39■■□□□ 1.01
COMMD4-213ENST00000565834 MKRN3Q13064 507 aaKnown RBP21.39■■□□□ 1.01
COMMD4-213ENST00000565834 AP3B2Q13367 1082 aa21.39■■□□□ 1.01
COMMD4-213ENST00000565834 SPRYD7Q5W111 196 aa21.39■■□□□ 1.01
COMMD4-213ENST00000565834 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.39■■□□□ 1.01
COMMD4-213ENST00000565834 DDX49Q9Y6V7 483 aaKnown RBP21.39■■□□□ 1.01
COMMD4-213ENST00000565834 PIK3CDO00329 1044 aa21.38■■□□□ 1.01
COMMD4-213ENST00000565834 TRAK2O60296 914 aa21.38■■□□□ 1.01
COMMD4-213ENST00000565834 BMP15O95972 392 aa21.38■■□□□ 1.01
COMMD4-213ENST00000565834 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
COMMD4-213ENST00000565834 TBCKQ8TEA7 893 aa21.38■■□□□ 1.01
COMMD4-213ENST00000565834 PGBD1Q96JS3 809 aa21.38■■□□□ 1.01
COMMD4-213ENST00000565834 ASCC2Q9H1I8 757 aaPredicted RBP21.38■■□□□ 1.01
COMMD4-213ENST00000565834 WNT7AO00755 349 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 ATP2A1O14983 1001 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 CFBP00751 764 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 OSBPP22059 807 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 TMEM132BQ14DG7 1078 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 ZNF174Q15697 407 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 TPRNQ4KMQ1 711 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 GPAT2Q6NUI2 795 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 NEK8Q86SG6 692 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 MB21D1Q8N884 522 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 MS4A4AQ96JQ5 239 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 P2RX7Q99572 595 aaKnown RBP21.37■■□□□ 1.01
COMMD4-213ENST00000565834 ZNF214Q9UL59 606 aaPredicted RBP21.37■■□□□ 1.01
COMMD4-213ENST00000565834 CCL15-CCL14A0A0B4J2E2 113 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 GCOM1H8Y6P7 765 aaPredicted RBP21.37■■□□□ 1.01
COMMD4-213ENST00000565834 PPP6R2O75170 966 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 MBD3O95983 291 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 FOSP01100 380 aaPredicted RBP21.37■■□□□ 1.01
COMMD4-213ENST00000565834 POLR2MP0CAP2 368 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 CCL15Q16663 113 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 SNRNP48Q6IEG0 339 aaKnown RBP21.37■■□□□ 1.01
COMMD4-213ENST00000565834 SAPCD2Q86UD0 394 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms