RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 BMP2KLQ5H9B9 411 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 PRAMEF19Q5SWL8 479 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 NSMFQ6X4W1 530 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 GDF15Q99988 308 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 Q9Y3F1 56 aa19.55■□□□□ 0.72
USB1-211ENST00000565662 SYNRGQ9UMZ2 1314 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 MCM3APO60318 1980 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 ZEB2O60315 1214 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 ADAMTS4O75173 837 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 RTP1P59025 263 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 NKX3-2P78367 333 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 SLC39A5Q6ZMH5 540 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 MCF2L2Q86YR7 1114 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 SAMD3Q8N6K7 520 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 MORC4Q8TE76 937 aa19.54■□□□□ 0.72
USB1-211ENST00000565662 UPF3AQ9H1J1 476 aaKnown RBP19.54■□□□□ 0.72
USB1-211ENST00000565662 RBM27Q9P2N5 1060 aaKnown RBP19.54■□□□□ 0.72
USB1-211ENST00000565662 ELP1O95163 1332 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 MYH6P13533 1939 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 CABYRO75952 493 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 MYCNP04198 464 aaPredicted RBP19.53■□□□□ 0.72
USB1-211ENST00000565662 SLC16A2P36021 539 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 GJA9P57773 515 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 CCDC144BQ3MJ40 725 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 TTBK2Q6IQ55 1244 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 GLT1D1Q96MS3 346 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 ZKSCAN3Q9BRR0 538 aa19.53■□□□□ 0.72
USB1-211ENST00000565662 MAP3K20Q9NYL2 800 aaKnown RBP19.53■□□□□ 0.72
USB1-211ENST00000565662 PTPDC1A2A3K4 754 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 CYP21A2P08686 494 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 ADCYAP1R1P41586 468 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 FXR1P51114 621 aaKnown RBP eCLIP19.52■□□□□ 0.72
USB1-211ENST00000565662 RNF20Q5VTR2 975 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 ANO1Q5XXA6 986 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 IQSEC1Q6DN90 963 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 GPR153Q6NV75 609 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 RNF207Q6ZRF8 634 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 KLHDC9Q8NEP7 349 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 FGD4Q96M96 766 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 STARD7Q9NQZ5 370 aa19.52■□□□□ 0.72
USB1-211ENST00000565662 ZMYND8Q9ULU4 1186 aaPredicted RBP19.52■□□□□ 0.72
USB1-211ENST00000565662 MRPL11Q9Y3B7 192 aaKnown RBP19.52■□□□□ 0.72
USB1-211ENST00000565662 A0A1W2PQ45 241 aaPredicted RBP19.51■□□□□ 0.71
USB1-211ENST00000565662 A0A1W2PQY0 241 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 NKRFO15226 690 aaKnown RBP eCLIP19.51■□□□□ 0.71
USB1-211ENST00000565662 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
USB1-211ENST00000565662 PGK1P00558 417 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 C6orf222P0C671 652 aaPredicted RBP19.51■□□□□ 0.71
USB1-211ENST00000565662 TAL1P17542 331 aaPredicted RBP19.51■□□□□ 0.71
USB1-211ENST00000565662 CNTN2Q02246 1040 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 TNFAIP2Q03169 654 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 CDC37Q16543 378 aaPredicted RBP19.51■□□□□ 0.71
USB1-211ENST00000565662 BRDTQ58F21 947 aaPredicted RBP19.51■□□□□ 0.71
USB1-211ENST00000565662 MUM1L1Q5H9M0 696 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 TMTC2Q8N394 836 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 TOX2Q96NM4 488 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 AP5M1Q9H0R1 490 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 ATP11BQ9Y2G3 1177 aa19.51■□□□□ 0.71
USB1-211ENST00000565662 SOWAHBA6NEL2 793 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 MAGEA10P43363 369 aaPredicted RBP19.5■□□□□ 0.71
USB1-211ENST00000565662 ALDH5A1P51649 535 aaPredicted RBP19.5■□□□□ 0.71
USB1-211ENST00000565662 ACLYP53396 1101 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 ATN1P54259 1190 aaPredicted RBP19.5■□□□□ 0.71
USB1-211ENST00000565662 WTAPQ15007 396 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 SEC23AQ15436 765 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 RASGRP2Q7LDG7 609 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 TDHQ8IZJ6 230 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 KATNBL1Q9H079 304 aa19.5■□□□□ 0.71
USB1-211ENST00000565662 TRIOBPQ9H2D6 2365 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 E7EWF7 191 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 IFIT3O14879 490 aaKnown RBP19.49■□□□□ 0.71
USB1-211ENST00000565662 NEFLP07196 543 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 BAATQ14032 418 aaPredicted RBP19.49■□□□□ 0.71
USB1-211ENST00000565662 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 FBXO11Q86XK2 927 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 ADGRF4Q8IZF3 695 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 CHMP4CQ96CF2 233 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 UBE2OQ9C0C9 1292 aaKnown RBP19.49■□□□□ 0.71
USB1-211ENST00000565662 IL25Q9H293 177 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 RBM8AQ9Y5S9 174 aaKnown RBP19.49■□□□□ 0.71
USB1-211ENST00000565662 LCTP09848 1927 aa19.49■□□□□ 0.71
USB1-211ENST00000565662 A0A0U1RQG5 324 aaPredicted RBP19.48■□□□□ 0.71
USB1-211ENST00000565662 DCDC2CA8MYV0 355 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 NFIBO00712 420 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 KIF5BP33176 963 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 RPS6P62753 249 aaKnown RBP19.48■□□□□ 0.71
USB1-211ENST00000565662 PDE4DQ08499 809 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 LRIT3Q3SXY7 679 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 NOL8Q76FK4 1167 aaKnown RBP19.48■□□□□ 0.71
USB1-211ENST00000565662 ANKRD33Q7Z3H0 272 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 TLK2Q86UE8 772 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 TMEM87BQ96K49 555 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 ESYT1Q9BSJ8 1104 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 LTBP2Q14767 1821 aa19.48■□□□□ 0.71
USB1-211ENST00000565662 TLR3O15455 904 aaKnown RBP19.47■□□□□ 0.71
USB1-211ENST00000565662 CLTBP09497 229 aa19.47■□□□□ 0.71
USB1-211ENST00000565662 SYN1P17600 705 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms