RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 ZHX2Q9Y6X8 837 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 UNCXA6NJT0 531 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 NEMFO60524 1076 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZNF165P49910 485 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 CBX1P83916 185 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 SPP2Q13103 211 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 PRKG1Q13976 671 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 TTLL12Q14166 644 aaPredicted RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 RILPL1Q5EBL4 403 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 KIAA1755Q5JYT7 1200 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 CCDC84Q86UT8 332 aaPredicted RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 ANKRD13AQ8IZ07 590 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 BLIDQ8IZY5 108 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 SHISA4Q96DD7 197 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 GLT8D2Q9H1C3 349 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 RTEL1Q9NZ71 1219 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 PAXBP1Q9Y5B6 917 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 CTAGE5O15320 804 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 MTMR2Q13614 643 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 VGLL4Q14135 290 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 NPY5RQ15761 445 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 CDC37Q16543 378 aaPredicted RBP10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 QRICH1Q2TAL8 776 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 SARM1Q6SZW1 724 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 TEX2Q8IWB9 1127 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 C12orf42Q96LP6 360 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 AMNQ9BXJ7 453 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 POLR3EQ9NVU0 708 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 RCOR1Q9UKL0 485 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 PRR12Q9ULL5 1215 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 FZD1Q9UP38 647 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 AFG3L2Q9Y4W6 797 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 SNCAIPQ9Y6H5 919 aa10.71□□□□□ -0.69
CNEP1R1-206ENST00000565556 OTOFQ9HC10 1997 aa10.71□□□□□ -0.7
CNEP1R1-206ENST00000565556 SMCO2A6NFE2 343 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 GOLGA6L19H0YKK7 550 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 NR1I2O75469 434 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 YEATS4O95619 227 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 TNNT1P13805 278 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 NCBP1Q09161 790 aaKnown RBP10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 NR5A1Q13285 461 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 STX1AQ16623 288 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 DLK2Q6UY11 383 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 ERO1BQ86YB8 467 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 PRPF38AQ8NAV1 312 aaKnown RBP10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 C16orf45Q96MC5 204 aaPredicted RBP10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP28Q96RU2 1077 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 TMOD4Q9NZQ9 345 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 CGNQ9P2M7 1197 aaKnown RBP10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 PNMA2Q9UL42 364 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 TRIM75PA6NK02 468 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 KIF20AO95235 890 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 FDX1P10109 184 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 VCAM1P19320 739 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 TRAPPC10P48553 1259 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 ADCY7P51828 1080 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 FKBP1BP68106 108 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 PPATQ06203 517 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 ANO1Q5XXA6 986 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 MAP1SQ66K74 1059 aaPredicted RBP10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 MCTP2Q6DN12 878 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 CCDC112Q8NEF3 446 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 KCNG4Q8TDN1 519 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 KIFC2Q96AC6 838 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 COA7Q96BR5 231 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 PGBD1Q96JS3 809 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 SLF1Q9BQI6 1058 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 DNAJC25Q9H1X3 360 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 PCDHA1Q9Y5I3 950 aa10.7□□□□□ -0.7
CNEP1R1-206ENST00000565556 UTRNP46939 3433 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 CCDC194A0A1B0GVG4 234 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 M0R2N6 131 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 PPP1R11O60927 126 aaPredicted RBP10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 POTEIP0CG38 1075 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 POTEJP0CG39 1038 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 CEBPZQ03701 1054 aaKnown RBP10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 LRMPQ12912 555 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 STK38Q15208 465 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 LDLRAD1Q5T700 205 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 KRT25Q7Z3Z0 450 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 JMYQ8N9B5 988 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 CUL5Q93034 780 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 MRFAP1L1Q96HT8 127 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 RANBP17Q9H2T7 1088 aaKnown RBP10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 RPAP3Q9H6T3 665 aaPredicted RBP10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 RIC8AQ9NPQ8 531 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 OGFRQ9NZT2 677 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms