RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CETPP11597 493 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 NAPAP54920 295 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 SPP2Q13103 211 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 IKQ13123 557 aaPredicted RBP21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 KIF22Q14807 665 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 FAM173BQ6P4H8 233 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 ZNF333Q96JL9 665 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 ZMYND12Q9H0C1 365 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 C6orf50Q9HD87 102 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 LMBRD1Q9NUN5 540 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 SNCAIPQ9Y6H5 919 aa21.89■■□□□ 1.09
CSPG4P13-201ENST00000565545 KIAA0100Q14667 2235 aaKnown RBP21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 SPDYE5A6NIY4 337 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 PRPF40AO75400 957 aaKnown RBP21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 NPY5RQ15761 445 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 ZYXQ15942 572 aaKnown RBP21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 CDC37Q16543 378 aaPredicted RBP21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 BLIDQ8IZY5 108 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 BICD2Q8TD16 824 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 CHAMP1Q96JM3 812 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 GLT8D2Q9H1C3 349 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 PRR12Q9ULL5 1215 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 AFG3L2Q9Y4W6 797 aa21.88■■□□□ 1.09
CSPG4P13-201ENST00000565545 FIBPO43427 364 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 MTMR2Q13614 643 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 QRICH1Q2TAL8 776 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 RILPL1Q5EBL4 403 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 ERO1BQ86YB8 467 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 TEX2Q8IWB9 1127 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 EMILIN3Q9NT22 766 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 POLR3EQ9NVU0 708 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 RTEL1Q9NZ71 1219 aa21.87■■□□□ 1.09
CSPG4P13-201ENST00000565545 PPATQ06203 517 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 SNAPC2Q13487 334 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 NBR1Q14596 966 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 SH3D19Q5HYK7 790 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 TYW1BQ6NUM6 668 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 OXER1Q8TDS5 423 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 TNFRSF25Q93038 417 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 SPATA32Q96LK8 384 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 AMNQ9BXJ7 453 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 TFIP11Q9UBB9 837 aaKnown RBP21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 RCOR1Q9UKL0 485 aa21.86■■□□□ 1.09
CSPG4P13-201ENST00000565545 SMCO2A6NFE2 343 aa21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 TLR2O60603 784 aa21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 FDX1P10109 184 aa21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 NR5A1Q13285 461 aa21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 LEO1Q8WVC0 666 aaPredicted RBP21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 USP28Q96RU2 1077 aa21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 RANBP17Q9H2T7 1088 aaKnown RBP21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 TMOD4Q9NZQ9 345 aa21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 NOL7Q9UMY1 257 aaKnown RBP21.85■■□□□ 1.09
CSPG4P13-201ENST00000565545 BTBD19C9JJ37 291 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 M0R2N6 131 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 IRF6O14896 467 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 YEATS4O95619 227 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 VCAM1P19320 739 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 TRAPPC10P48553 1259 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 NASPP49321 788 aaPredicted RBP21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 FBXO11Q86XK2 927 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 PRPF38AQ8NAV1 312 aaKnown RBP21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 SLF1Q9BQI6 1058 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 PNMA2Q9UL42 364 aa21.84■■□□□ 1.09
CSPG4P13-201ENST00000565545 TRIM75PA6NK02 468 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 PPP1R11O60927 126 aaPredicted RBP21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 ECM2O94769 699 aaPredicted RBP21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 MBD3O95983 291 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 ADCY7P51828 1080 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 MRPL12P52815 198 aaKnown RBP21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 PPIL2Q13356 520 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 ANO1Q5XXA6 986 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 SH3TC2Q8TF17 1288 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 COA7Q96BR5 231 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 ARHGAP39Q9C0H5 1083 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 GDPD2Q9HCC8 539 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 ZCCHC17Q9NP64 241 aaKnown RBP21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 RIC8AQ9NPQ8 531 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 PCDHA1Q9Y5I3 950 aa21.83■■□□□ 1.09
CSPG4P13-201ENST00000565545 CXCL11O14625 94 aa21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 TRAK2O60296 914 aa21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 UBE2HP62256 183 aa21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 LACTBP83111 547 aaPredicted RBP21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 KRT25Q7Z3Z0 450 aa21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 RPAP3Q9H6T3 665 aaPredicted RBP21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 PTPRFP10586 1907 aa21.82■■□□□ 1.08
CSPG4P13-201ENST00000565545 CCDC194A0A1B0GVG4 234 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 GNRH1P01148 92 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 HMGCS2P54868 508 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 STK38Q15208 465 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 MCTP2Q6DN12 878 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 REXO1Q8N1G1 1221 aaKnown RBP21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 KCNG4Q8TDN1 519 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 CUL5Q93034 780 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 KIFC2Q96AC6 838 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 TANGO6Q9C0B7 1094 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 PCDHA6Q9UN73 950 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 CEP131Q9UPN4 1083 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 PCDHA8Q9Y5H6 950 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 HTTP42858 3142 aa21.81■■□□□ 1.08
CSPG4P13-201ENST00000565545 PARP14Q460N5 1801 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms