RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 A0A1W2PQU0 124 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 A0A1W2PQY0 241 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 AGRPO00253 132 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 TBC1D8O95759 1140 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 PRKCAP17252 672 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 SDHBP21912 280 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 ECI1P42126 302 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 GRIA2P42262 883 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 LAPTM5Q13571 262 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 NBPF6Q5VWK0 638 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 NUP43Q8NFH3 380 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 NBPF4Q96M43 638 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 DIRC2Q96SL1 478 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 NKX2-4Q9H2Z4 354 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 CWC22Q9HCG8 908 aaKnown RBP6.55□□□□□ -1.36
PALB2-203ENST00000565038 CYP26B1Q9NR63 512 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 CLEC1BQ9P126 229 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 SIRPGQ9P1W8 387 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 YBX2Q9Y2T7 364 aaKnown RBP6.55□□□□□ -1.36
PALB2-203ENST00000565038 MSRB2Q9Y3D2 182 aa6.55□□□□□ -1.36
PALB2-203ENST00000565038 A0A1W2PQ27 194 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 A0A1W2PQ64 194 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 A0A1W2PQC6 194 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 A0A1W2PQD8 194 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 PDPK1O15530 556 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 SNRPB2P08579 225 aaKnown RBP6.54□□□□□ -1.36
PALB2-203ENST00000565038 PLS3P13797 630 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 PPP2R2AP63151 447 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 CYP4F3Q08477 520 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 SNX17Q15036 470 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 SPATC1Q76KD6 591 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 COPS5Q92905 334 aa6.54□□□□□ -1.36
PALB2-203ENST00000565038 INTS4Q96HW7 963 aaKnown RBP6.54□□□□□ -1.36
PALB2-203ENST00000565038 NSUN3Q9H649 340 aaKnown RBP6.54□□□□□ -1.36
PALB2-203ENST00000565038 NPHP3-ACAD11A0A0J9YXS1 232 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 THBDP07204 575 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 MSL3P1P0C860 447 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 PAMP19021 973 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 PDE6BP35913 854 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 KCNJ6P48051 423 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 CYP4F8P98187 520 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 SERINC3Q13530 473 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 PRSS53Q2L4Q9 553 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 ADGRF1Q5T601 910 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 ST13P5Q8NFI4 369 aaPredicted RBP6.53□□□□□ -1.36
PALB2-203ENST00000565038 DRC1Q96MC2 740 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 SLC6A17Q9H1V8 727 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 FAM53CQ9NYF3 392 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 PFDN2Q9UHV9 154 aa6.53□□□□□ -1.36
PALB2-203ENST00000565038 FAM221BA6H8Z2 402 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 PNLIPP16233 465 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 HOXC12P31275 282 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 L1CAMP32004 1257 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 MVKQ03426 396 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 OGFOD2Q6N063 350 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 FRS2Q8WU20 508 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 CCDC113Q9H0I3 377 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 CRTAC1Q9NQ79 661 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 ACSL6Q9UKU0 697 aa6.52□□□□□ -1.37
PALB2-203ENST00000565038 IQCA1LA6NCM1 817 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 CAPNS1P04632 268 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 TACR1P25103 407 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 RASGRF1Q13972 1273 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 MTERF2Q49AM1 385 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 SOGA3Q5TF21 947 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 MBLAC2Q68D91 279 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 TMEM145Q8NBT3 493 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 NPLOC4Q8TAT6 608 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 DEPDC7Q96QD5 511 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 DCP1AQ9NPI6 582 aaPredicted RBP6.51□□□□□ -1.37
PALB2-203ENST00000565038 GULP1Q9UBP9 304 aa6.51□□□□□ -1.37
PALB2-203ENST00000565038 TMEFF2Q9UIK5 374 aaPredicted RBP6.51□□□□□ -1.37
PALB2-203ENST00000565038 C7orf72A4D263 438 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 ARNTLO00327 626 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 DIAPH1O60610 1272 aaKnown RBP6.5□□□□□ -1.37
PALB2-203ENST00000565038 PPP1R11O60927 126 aaPredicted RBP6.5□□□□□ -1.37
PALB2-203ENST00000565038 GFRA1P56159 465 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 HSP90AA2PQ14568 343 aaPredicted RBP6.5□□□□□ -1.37
PALB2-203ENST00000565038 RASA3Q14644 834 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 INF2Q27J81 1249 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
PALB2-203ENST00000565038 DENND5AQ6IQ26 1287 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 ZNF605Q86T29 641 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 KREMEN2Q8NCW0 462 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 SGSM3Q96HU1 749 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 SRPK1Q96SB4 655 aaKnown RBP6.5□□□□□ -1.37
PALB2-203ENST00000565038 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 SPATA9Q9BWV2 254 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 EPB41L4BQ9H329 900 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 ARHGEF4Q9NR80 690 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 SNTG2Q9NY99 539 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 RWDD3Q9Y3V2 267 aa6.5□□□□□ -1.37
PALB2-203ENST00000565038 A0A1W2PQJ5 194 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 PRODHO43272 600 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 SCG5P05408 212 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 ARL4AP40617 200 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms