RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TRIM43Q96BQ3 446 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 MAF1Q9H063 256 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 KATNBL1Q9H079 304 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 CYP39A1Q9NYL5 469 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 CCPG1Q9ULG6 757 aa14.34□□□□□ -0.11
GTF3C1-204ENST00000564664 SOWAHBA6NEL2 793 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 ZEB2O60315 1214 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 CABYRO75952 493 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 RAG1P15918 1043 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 CDK7P50613 346 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 TMEM39AQ9NV64 488 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 MTMR10Q9NXD2 777 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
GTF3C1-204ENST00000564664 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 PQBP1O60828 265 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 ASGR1P07306 291 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 SNHG28P0DPA3 235 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 PDHBP11177 359 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 HAND2P61296 217 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 FAAP100Q0VG06 881 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 SHHQ15465 462 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 IQCA1Q86XH1 822 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 EXOC6Q8TAG9 804 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 ANKS1AQ92625 1134 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 VTI1AQ96AJ9 217 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 MPHOSPH6Q99547 160 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 DSCC1Q9BVC3 393 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 AP5M1Q9H0R1 490 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 VTA1Q9NP79 307 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 MTMR7Q9Y216 660 aa14.32□□□□□ -0.12
GTF3C1-204ENST00000564664 B4DLN1 442 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 ARVCFO00192 962 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 TIMP1P01033 207 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 SLC16A2P36021 539 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 MRPL12P52815 198 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 SMAD3P84022 425 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 ZNF543Q08ER8 600 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 TTBK2Q6IQ55 1244 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 CWC27Q6UX04 472 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 CHMP4CQ96CF2 233 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 GNEQ9Y223 722 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 WDR19Q8NEZ3 1342 aa14.31□□□□□ -0.12
GTF3C1-204ENST00000564664 CTAGE5O15320 804 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 TLR3O15455 904 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 SNAP25P60880 206 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 FPGSQ05932 587 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 BAATQ14032 418 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 NSMFQ6X4W1 530 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 SLC17A8Q8NDX2 589 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 KRT23Q9C075 422 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
GTF3C1-204ENST00000564664 MCM3APO60318 1980 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 DYNC1LI2O43237 492 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 ADCY6O43306 1168 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 FSCN1Q16658 493 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 TAPT1Q6NXT6 567 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 Q7L0L9 218 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 TLK2Q86UE8 772 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 SLC43A3Q8NBI5 491 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 TBX21Q9UL17 535 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 FRMPD2Q68DX3 1309 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
GTF3C1-204ENST00000564664 SMPD1P17405 629 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 ITGB8P26012 769 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.121e-8■■□□□ 11.4
GTF3C1-204ENST00000564664 DUSP28Q4G0W2 176 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 C9orf50Q5SZB4 431 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 MFSD5Q6N075 450 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 RNF207Q6ZRF8 634 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 ZSCAN10Q96SZ4 725 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 KAT14Q9H8E8 782 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 ZSWIM5Q9P217 1185 aa14.28□□□□□ -0.12
GTF3C1-204ENST00000564664 ASTN1O14525 1302 aa14.27□□□□□ -0.12
GTF3C1-204ENST00000564664 TMEM265A0A087WTH1 108 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 RBM47A0AV96 593 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 NKRFO15226 690 aaKnown RBP eCLIP14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 KDM4AO75164 1064 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 RASGRP2Q7LDG7 609 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 FAM126BQ8IXS8 530 aa14.27□□□□□ -0.13
GTF3C1-204ENST00000564664 TMEM199Q8N511 208 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms