RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 MUM1L1Q5H9M0 696 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 C9orf50Q5SZB4 431 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 TBC1D10CQ8IV04 446 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 GLT1D1Q96MS3 346 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 RNF41Q9H4P4 317 aaPredicted RBP19.72■□□□□ 0.75
CCNF-203ENST00000564236 TBX21Q9UL17 535 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 CCPG1Q9ULG6 757 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 ISY1Q9ULR0 285 aaKnown RBP19.72■□□□□ 0.75
CCNF-203ENST00000564236 Q9Y3F1 56 aa19.72■□□□□ 0.75
CCNF-203ENST00000564236 DCDC2CA8MYV0 355 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 PQBP1O60828 265 aaKnown RBP19.71■□□□□ 0.75
CCNF-203ENST00000564236 C6orf222P0C671 652 aaPredicted RBP19.71■□□□□ 0.75
CCNF-203ENST00000564236 CCDC96Q2M329 555 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 TTBK2Q6IQ55 1244 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 CCDC174Q6PII3 467 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 MFSD6Q6ZSS7 791 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 RILPL2Q969X0 211 aa19.71■□□□□ 0.75
CCNF-203ENST00000564236 SNAP25P60880 206 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 HAND2P61296 217 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 IRX5P78411 483 aaPredicted RBP19.7■□□□□ 0.74
CCNF-203ENST00000564236 SMAD3P84022 425 aaKnown RBP19.7■□□□□ 0.74
CCNF-203ENST00000564236 TNFAIP2Q03169 654 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 RRP12Q5JTH9 1297 aaKnown RBP19.7■□□□□ 0.74
CCNF-203ENST00000564236 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 DGKHQ86XP1 1220 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 EXOC6Q8TAG9 804 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 TOMM22Q9NS69 142 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 TMEM39AQ9NV64 488 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 WDR19Q8NEZ3 1342 aa19.7■□□□□ 0.74
CCNF-203ENST00000564236 LRRC37A2A6NM11 1700 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
CCNF-203ENST00000564236 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.69■□□□□ 0.74
CCNF-203ENST00000564236 HIP1O00291 1037 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 RAG1P15918 1043 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 SLC16A2P36021 539 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 GNASQ5JWF2 1037 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 IQSEC1Q6DN90 963 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 TAPT1Q6NXT6 567 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 SLC43A3Q8NBI5 491 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 ANKS1AQ92625 1134 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 ESR2Q92731 530 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 SEZ6LQ9BYH1 1024 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 MAF1Q9H063 256 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 VTA1Q9NP79 307 aa19.69■□□□□ 0.74
CCNF-203ENST00000564236 ARVCFO00192 962 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 CABYRO75952 493 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 TIMP1P01033 207 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 CLEC4DQ8WXI8 215 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 CHMP4CQ96CF2 233 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 DSCC1Q9BVC3 393 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 NEDD4P46934 1319 aa19.68■□□□□ 0.74
CCNF-203ENST00000564236 ZNF213O14771 459 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 EPHB4P54760 987 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 FPGSQ05932 587 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 CCDC178Q5BJE1 867 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 GPATCH4Q5T3I0 446 aaKnown RBP19.67■□□□□ 0.74
CCNF-203ENST00000564236 TLK2Q86UE8 772 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 FAM126BQ8IXS8 530 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 GUCD1Q96NT3 240 aa19.67■□□□□ 0.74
CCNF-203ENST00000564236 ADD3Q9UEY8 706 aaKnown RBP19.67■□□□□ 0.74
CCNF-203ENST00000564236 RBM47A0AV96 593 aaKnown RBP19.66■□□□□ 0.74
CCNF-203ENST00000564236 NFIBO00712 420 aa19.66■□□□□ 0.74
CCNF-203ENST00000564236 CD4P01730 458 aa19.66■□□□□ 0.74
CCNF-203ENST00000564236 SMPD1P17405 629 aa19.66■□□□□ 0.74
CCNF-203ENST00000564236 BAATQ14032 418 aaPredicted RBP19.66■□□□□ 0.74
CCNF-203ENST00000564236 NSMFQ6X4W1 530 aa19.66■□□□□ 0.74
CCNF-203ENST00000564236 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
CCNF-203ENST00000564236 MTMR7Q9Y216 660 aa19.66■□□□□ 0.74
CCNF-203ENST00000564236 FRMPD2Q68DX3 1309 aaPredicted RBP19.66■□□□□ 0.74
CCNF-203ENST00000564236 CDH23Q9H251 3354 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 LCTP09848 1927 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 MCM3APO60318 1980 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 TMEM265A0A087WTH1 108 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 EDNRBP24530 442 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 ALDH5A1P51649 535 aaPredicted RBP19.65■□□□□ 0.74
CCNF-203ENST00000564236 FSCN1Q16658 493 aaKnown RBP19.65■□□□□ 0.74
CCNF-203ENST00000564236 ZNF697Q5TEC3 545 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 MFSD5Q6N075 450 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 CWC27Q6UX04 472 aaKnown RBP19.65■□□□□ 0.74
CCNF-203ENST00000564236 SLC17A8Q8NDX2 589 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 RGS22Q8NE09 1264 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 GPCPD1Q9NPB8 672 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 PDGFCQ9NRA1 345 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 DIAPH3Q9NSV4 1193 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 LAMA4Q16363 1823 aa19.65■□□□□ 0.74
CCNF-203ENST00000564236 DUSP28Q4G0W2 176 aa19.64■□□□□ 0.73
CCNF-203ENST00000564236 IQCA1Q86XH1 822 aa19.64■□□□□ 0.73
CCNF-203ENST00000564236 FBXO16Q8IX29 292 aaPredicted RBP19.64■□□□□ 0.73
CCNF-203ENST00000564236 DNERQ8NFT8 737 aa19.64■□□□□ 0.73
CCNF-203ENST00000564236 PURBQ96QR8 312 aaKnown RBP19.64■□□□□ 0.73
CCNF-203ENST00000564236 ZEB2O60315 1214 aa19.63■□□□□ 0.73
CCNF-203ENST00000564236 BEX3Q00994 111 aa19.63■□□□□ 0.73
CCNF-203ENST00000564236 RASIP1Q5U651 963 aa19.63■□□□□ 0.73
CCNF-203ENST00000564236 CXCL17Q6UXB2 119 aa19.63■□□□□ 0.73
CCNF-203ENST00000564236 RNPC3Q96LT9 517 aaKnown RBP19.63■□□□□ 0.73
CCNF-203ENST00000564236 AP5M1Q9H0R1 490 aa19.63■□□□□ 0.73
CCNF-203ENST00000564236 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
CCNF-203ENST00000564236 DDX49Q9Y6V7 483 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms