RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.5■□□□□ 0.55
SF3B3-203ENST00000562874 NFIBO00712 420 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 C6orf222P0C671 652 aaPredicted RBP18.5■□□□□ 0.55
SF3B3-203ENST00000562874 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 PCP11498 1178 aaKnown RBP18.5■□□□□ 0.55
SF3B3-203ENST00000562874 ZNF543Q08ER8 600 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 BTNL9Q6UXG8 535 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 EEPD1Q7L9B9 569 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 DSCC1Q9BVC3 393 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 CYP39A1Q9NYL5 469 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 DOCK5Q9H7D0 1870 aa18.5■□□□□ 0.55
SF3B3-203ENST00000562874 PQBP1O60828 265 aaKnown RBP18.49■□□□□ 0.55
SF3B3-203ENST00000562874 ACLYP53396 1101 aa18.49■□□□□ 0.55
SF3B3-203ENST00000562874 TLE2Q04725 743 aa18.49■□□□□ 0.55
SF3B3-203ENST00000562874 SLC30A10Q6XR72 485 aa18.49■□□□□ 0.55
SF3B3-203ENST00000562874 FBXO16Q8IX29 292 aaPredicted RBP18.49■□□□□ 0.55
SF3B3-203ENST00000562874 STARD7Q9NQZ5 370 aa18.49■□□□□ 0.55
SF3B3-203ENST00000562874 DUSP11O75319 330 aaKnown RBP18.48■□□□□ 0.55
SF3B3-203ENST00000562874 KCNA10Q16322 511 aa18.48■□□□□ 0.55
SF3B3-203ENST00000562874 IMMTQ16891 758 aaKnown RBP18.48■□□□□ 0.55
SF3B3-203ENST00000562874 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
SF3B3-203ENST00000562874 BADQ92934 168 aa18.48■□□□□ 0.55
SF3B3-203ENST00000562874 SCN5AQ14524 2016 aa18.48■□□□□ 0.55
SF3B3-203ENST00000562874 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
SF3B3-203ENST00000562874 PTPDC1A2A3K4 754 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 TRIM43BA6NCK2 446 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 SNHG28P0DPA3 235 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 BEX3Q00994 111 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 Q7L0L9 218 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 IQCA1Q86XH1 822 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 PNMA1Q8ND90 353 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 TRIM43Q96BQ3 446 aaPredicted RBP18.47■□□□□ 0.55
SF3B3-203ENST00000562874 TNKSO95271 1327 aa18.47■□□□□ 0.55
SF3B3-203ENST00000562874 ASB14A6NK59 587 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 ASGR1P07306 291 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 CLTBP09497 229 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 ITGB8P26012 769 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 BAATQ14032 418 aaPredicted RBP18.46■□□□□ 0.55
SF3B3-203ENST00000562874 LRIT3Q3SXY7 679 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 USH1GQ495M9 461 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 TMEM63BQ5T3F8 832 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 C1orf53Q5VUE5 145 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 CCSAPQ6IQ19 270 aaPredicted RBP18.46■□□□□ 0.55
SF3B3-203ENST00000562874 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
SF3B3-203ENST00000562874 ENAHQ8N8S7 591 aaPredicted RBP18.46■□□□□ 0.55
SF3B3-203ENST00000562874 TTC14Q96N46 770 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 UBA5Q9GZZ9 404 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
SF3B3-203ENST00000562874 KAT14Q9H8E8 782 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 PDGFCQ9NRA1 345 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 RAD50Q92878 1312 aa18.46■□□□□ 0.55
SF3B3-203ENST00000562874 SCN10AQ9Y5Y9 1956 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 MOXD2PA6NHM9 499 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 CTAGE5O15320 804 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 CALML3P27482 149 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 CST5P28325 142 aaPredicted RBP18.45■□□□□ 0.54
SF3B3-203ENST00000562874 ALDH5A1P51649 535 aaPredicted RBP18.45■□□□□ 0.54
SF3B3-203ENST00000562874 GJA9P57773 515 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 TNFAIP2Q03169 654 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 C9orf50Q5SZB4 431 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 TLK2Q86UE8 772 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 ZSCAN10Q96SZ4 725 aaPredicted RBP18.45■□□□□ 0.54
SF3B3-203ENST00000562874 TSEN34Q9BSV6 310 aaKnown RBP18.45■□□□□ 0.54
SF3B3-203ENST00000562874 ZSWIM5Q9P217 1185 aa18.45■□□□□ 0.54
SF3B3-203ENST00000562874 TRIP12Q14669 1992 aaPredicted RBP18.44■□□□□ 0.54
SF3B3-203ENST00000562874 CDC37Q16543 378 aaPredicted RBP18.44■□□□□ 0.54
SF3B3-203ENST00000562874 GNASQ5JWF2 1037 aa18.44■□□□□ 0.54
SF3B3-203ENST00000562874 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
SF3B3-203ENST00000562874 NUP133Q8WUM0 1156 aa18.44■□□□□ 0.54
SF3B3-203ENST00000562874 GLT1D1Q96MS3 346 aa18.44■□□□□ 0.54
SF3B3-203ENST00000562874 SPC25Q9HBM1 224 aa18.44■□□□□ 0.54
SF3B3-203ENST00000562874 WDR19Q8NEZ3 1342 aa18.44■□□□□ 0.54
SF3B3-203ENST00000562874 SMPD1P17405 629 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 PTH1RQ03431 593 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
SF3B3-203ENST00000562874 RNF207Q6ZRF8 634 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 CYB5R4Q7L1T6 521 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
SF3B3-203ENST00000562874 UBAC1Q9BSL1 405 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 KRT23Q9C075 422 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 GNEQ9Y223 722 aaKnown RBP18.43■□□□□ 0.54
SF3B3-203ENST00000562874 TAF6LQ9Y6J9 622 aa18.43■□□□□ 0.54
SF3B3-203ENST00000562874 DHX16O60231 1041 aaKnown RBP18.42■□□□□ 0.54
SF3B3-203ENST00000562874 CHMLP26374 656 aa18.42■□□□□ 0.54
SF3B3-203ENST00000562874 FAAP100Q0VG06 881 aa18.42■□□□□ 0.54
SF3B3-203ENST00000562874 SHHQ15465 462 aa18.42■□□□□ 0.54
SF3B3-203ENST00000562874 TAPT1Q6NXT6 567 aa18.42■□□□□ 0.54
SF3B3-203ENST00000562874 VTI1AQ96AJ9 217 aa18.42■□□□□ 0.54
SF3B3-203ENST00000562874 TMEM39AQ9NV64 488 aa18.42■□□□□ 0.54
SF3B3-203ENST00000562874 RAG1P15918 1043 aa18.41■□□□□ 0.54
SF3B3-203ENST00000562874 RPS6P62753 249 aaKnown RBP18.41■□□□□ 0.54
SF3B3-203ENST00000562874 CXCL17Q6UXB2 119 aa18.41■□□□□ 0.54
SF3B3-203ENST00000562874 KIAA1211Q6ZU35 1233 aa18.41■□□□□ 0.54
SF3B3-203ENST00000562874 DEFB123Q8N688 67 aa18.41■□□□□ 0.54
SF3B3-203ENST00000562874 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
SF3B3-203ENST00000562874 VTA1Q9NP79 307 aa18.41■□□□□ 0.54
SF3B3-203ENST00000562874 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
SF3B3-203ENST00000562874 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms