RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 TMEM260Q9NX78 707 aa16.03■□□□□ 0.16
SPG7-206ENST00000562775 TRAF5O00463 557 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 ICAM1P05362 532 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 UBE2SQ16763 222 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
SPG7-206ENST00000562775 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
SPG7-206ENST00000562775 TBCKQ8TEA7 893 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 MRPS27Q92552 414 aaKnown RBP16.02■□□□□ 0.16
SPG7-206ENST00000562775 CLMNQ96JQ2 1002 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 PNMA2Q9UL42 364 aa16.02■□□□□ 0.16
SPG7-206ENST00000562775 MRPL11Q9Y3B7 192 aaKnown RBP16.02■□□□□ 0.16
SPG7-206ENST00000562775 ABCB11O95342 1321 aa16.02■□□□□ 0.15
SPG7-206ENST00000562775 CXCL11O14625 94 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 MEIS2O14770 477 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 CMA1P23946 247 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 AP3B2Q13367 1082 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 CATSPERGQ6ZRH7 1159 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 CCDC73Q6ZRK6 1079 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 NMRK2Q9NPI5 230 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
SPG7-206ENST00000562775 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
SPG7-206ENST00000562775 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
SPG7-206ENST00000562775 ZNF536O15090 1300 aa16.01■□□□□ 0.15
SPG7-206ENST00000562775 USP17L15C9J2P7 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L13C9JLJ4 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L11C9JVI0 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L18D6R9N7 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L22D6RA61 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L17D6RBQ6 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L19D6RCP7 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L20D6RJB6 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 ZBED4O75132 1171 aa16■□□□□ 0.15
SPG7-206ENST00000562775 MCM7P33993 719 aa16■□□□□ 0.15
SPG7-206ENST00000562775 FKBP1BP68106 108 aa16■□□□□ 0.15
SPG7-206ENST00000562775 ATP2C1P98194 919 aaPredicted RBP16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L24Q0WX57 530 aa16■□□□□ 0.15
SPG7-206ENST00000562775 PTGDRQ13258 359 aa16■□□□□ 0.15
SPG7-206ENST00000562775 PPIL2Q13356 520 aa16■□□□□ 0.15
SPG7-206ENST00000562775 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
SPG7-206ENST00000562775 ZSCAN23Q3MJ62 389 aa16■□□□□ 0.15
SPG7-206ENST00000562775 CCDC183Q5T5S1 534 aa16■□□□□ 0.15
SPG7-206ENST00000562775 USP17L6PQ6QN14 398 aa16■□□□□ 0.15
SPG7-206ENST00000562775 FERMT2Q96AC1 680 aa16■□□□□ 0.15
SPG7-206ENST00000562775 OTUD5Q96G74 571 aa16■□□□□ 0.15
SPG7-206ENST00000562775 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
SPG7-206ENST00000562775 DACT1Q9NYF0 836 aa16■□□□□ 0.15
SPG7-206ENST00000562775 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
SPG7-206ENST00000562775 MYPNQ86TC9 1320 aa16■□□□□ 0.15
SPG7-206ENST00000562775 PARP14Q460N5 1801 aa16■□□□□ 0.15
SPG7-206ENST00000562775 PTPRFP10586 1907 aa16■□□□□ 0.15
SPG7-206ENST00000562775 PIK3CDO00329 1044 aa16■□□□□ 0.15
SPG7-206ENST00000562775 OPLAHO14841 1288 aa16■□□□□ 0.15
SPG7-206ENST00000562775 IRF6O14896 467 aa16■□□□□ 0.15
SPG7-206ENST00000562775 FOSP01100 380 aaPredicted RBP16■□□□□ 0.15
SPG7-206ENST00000562775 DSG3P32926 999 aa16■□□□□ 0.15
SPG7-206ENST00000562775 FAM160A1Q05DH4 1040 aa16■□□□□ 0.15
SPG7-206ENST00000562775 COG2Q14746 738 aa16■□□□□ 0.15
SPG7-206ENST00000562775 LETM2Q2VYF4 491 aa16■□□□□ 0.15
SPG7-206ENST00000562775 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
SPG7-206ENST00000562775 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
SPG7-206ENST00000562775 CLIC6Q96NY7 704 aa16■□□□□ 0.15
SPG7-206ENST00000562775 GOLPH3LQ9H4A5 285 aa16■□□□□ 0.15
SPG7-206ENST00000562775 ZNF408Q9H9D4 720 aa16■□□□□ 0.15
SPG7-206ENST00000562775 CCPG1Q9ULG6 757 aa16■□□□□ 0.15
SPG7-206ENST00000562775 ADAMTS5Q9UNA0 930 aa16■□□□□ 0.15
SPG7-206ENST00000562775 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
SPG7-206ENST00000562775 A0A0G2JLL6 359 aaPredicted RBP15.99■□□□□ 0.15
SPG7-206ENST00000562775 VWA5AO00534 786 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 NR1I2O75469 434 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
SPG7-206ENST00000562775 FMR1Q06787 632 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPG7-206ENST00000562775 GSE1Q14687 1217 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
SPG7-206ENST00000562775 SHC4Q6S5L8 630 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 PRRT2Q7Z6L0 340 aaPredicted RBP15.99■□□□□ 0.15
SPG7-206ENST00000562775 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 ENGASEQ8NFI3 743 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 ATG4CQ96DT6 458 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 MRVI1Q9Y6F6 885 aa15.99■□□□□ 0.15
SPG7-206ENST00000562775 RLFQ13129 1914 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 A0A1B0GVL5 298 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 LAD1O00515 517 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 LETM1O95202 739 aaPredicted RBP15.98■□□□□ 0.15
SPG7-206ENST00000562775 RESP18Q5W5W9 173 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
SPG7-206ENST00000562775 OPTNQ96CV9 577 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 SLC10A4Q96EP9 437 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 NAP1L4Q99733 375 aaKnown RBP15.98■□□□□ 0.15
SPG7-206ENST00000562775 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 RAVER2Q9HCJ3 691 aaKnown RBP15.98■□□□□ 0.15
SPG7-206ENST00000562775 HOXC10Q9NYD6 342 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 SMCHD1A6NHR9 2005 aa15.98■□□□□ 0.15
SPG7-206ENST00000562775 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
SPG7-206ENST00000562775 CCNT1O60563 726 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms