RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TOB1P50616 345 aaPredicted RBP11.76□□□□□ -0.53
USP3-219ENST00000561326 SNAP25P60880 206 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 PABPC4Q13310 644 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP3-219ENST00000561326 TTC38Q5R3I4 469 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 MOB2Q70IA6 237 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
USP3-219ENST00000561326 GBA2Q9HCG7 927 aaPredicted RBP11.76□□□□□ -0.53
USP3-219ENST00000561326 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 RLFQ13129 1914 aa11.76□□□□□ -0.53
USP3-219ENST00000561326 IRF6O14896 467 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 CUTAO60888 179 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
USP3-219ENST00000561326 CELF2O95319 508 aaKnown RBP11.75□□□□□ -0.53
USP3-219ENST00000561326 DSG3P32926 999 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 ORC2Q13416 577 aaPredicted RBP11.75□□□□□ -0.53
USP3-219ENST00000561326 JAKMIP3Q5VZ66 844 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 GADL1Q6ZQY3 521 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 OPTNQ96CV9 577 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 EHMT1Q9H9B1 1298 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 MORC2Q9Y6X9 1032 aaPredicted RBP11.75□□□□□ -0.53
USP3-219ENST00000561326 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
USP3-219ENST00000561326 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
USP3-219ENST00000561326 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 PIK3CDO00329 1044 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 LAD1O00515 517 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 VWA5AO00534 786 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 HOXA7P31268 230 aaPredicted RBP11.74□□□□□ -0.53
USP3-219ENST00000561326 OAZ1P54368 228 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 AP3B2Q13367 1082 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 PTPAQ15257 358 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 ZNF174Q15697 407 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 INF2Q27J81 1249 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
USP3-219ENST00000561326 NEK8Q86SG6 692 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 CPXCR1Q8N123 301 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
USP3-219ENST00000561326 GPT2Q8TD30 523 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 RASGRP4Q8TDF6 673 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 FERMT2Q96AC1 680 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 FTOQ9C0B1 505 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP3-219ENST00000561326 MAF1Q9H063 256 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
USP3-219ENST00000561326 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
USP3-219ENST00000561326 PCDHA7Q9UN72 937 aa11.74□□□□□ -0.53
USP3-219ENST00000561326 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 GCOM1H8Y6P7 765 aaPredicted RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 ITGBL1O95965 494 aaPredicted RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 POLR2MP0CAP2 368 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 OSBPP22059 807 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 CMA1P23946 247 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 MARCKSP29966 332 aaPredicted RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 USP11P51784 963 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 IRX3P78415 501 aaPredicted RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 PTGDRQ13258 359 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 DGKZQ13574 1117 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 EARS2Q5JPH6 523 aaKnown RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
USP3-219ENST00000561326 MB21D1Q8N884 522 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 ADAMTS5Q9UNA0 930 aa11.73□□□□□ -0.53
USP3-219ENST00000561326 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 MEIS2O14770 477 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 CCNT1O60563 726 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 LETM1O95202 739 aaPredicted RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 CFBP00751 764 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 CETPP11597 493 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 ALAS1P13196 640 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 GCFC2P16383 781 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 PTPREP23469 700 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 MCM7P33993 719 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 GTF2A2P52657 109 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 UBE2SQ16763 222 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 TKFCQ3LXA3 575 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 CAVIN1Q6NZI2 390 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
USP3-219ENST00000561326 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
USP3-219ENST00000561326 ATG4CQ96DT6 458 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms