RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KIAA0355O15063 1070 aa19.11■□□□□ 0.65
SNX1-213ENST00000561026 IRX5P78411 483 aaPredicted RBP19.11■□□□□ 0.65
SNX1-213ENST00000561026 C9orf50Q5SZB4 431 aa19.11■□□□□ 0.65
SNX1-213ENST00000561026 TBC1D10CQ8IV04 446 aa19.11■□□□□ 0.65
SNX1-213ENST00000561026 GLT1D1Q96MS3 346 aa19.11■□□□□ 0.65
SNX1-213ENST00000561026 RANBP17Q9H2T7 1088 aaKnown RBP19.11■□□□□ 0.65
SNX1-213ENST00000561026 A0A0C4DFX4 3053 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 ASTN1O14525 1302 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 ELP1O95163 1332 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 MCM3APO60318 1980 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 ASGR1P07306 291 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 NKX3-2P78367 333 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 FAAP100Q0VG06 881 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 GNASQ5JWF2 1037 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 SYDE2Q5VT97 1194 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 FAM109BQ6ICB4 259 aaPredicted RBP19.1■□□□□ 0.65
SNX1-213ENST00000561026 RNF41Q9H4P4 317 aaPredicted RBP19.1■□□□□ 0.65
SNX1-213ENST00000561026 TMEM39AQ9NV64 488 aa19.1■□□□□ 0.65
SNX1-213ENST00000561026 FRMPD2Q68DX3 1309 aaPredicted RBP19.09■□□□□ 0.65
SNX1-213ENST00000561026 DCDC2CA8MYV0 355 aa19.09■□□□□ 0.65
SNX1-213ENST00000561026 PDHBP11177 359 aa19.09■□□□□ 0.65
SNX1-213ENST00000561026 TNFAIP2Q03169 654 aa19.09■□□□□ 0.65
SNX1-213ENST00000561026 CWC27Q6UX04 472 aaKnown RBP19.09■□□□□ 0.65
SNX1-213ENST00000561026 GPCPD1Q9NPB8 672 aa19.09■□□□□ 0.65
SNX1-213ENST00000561026 STXBP5LQ9Y2K9 1186 aa19.09■□□□□ 0.65
SNX1-213ENST00000561026 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.08■□□□□ 0.65
SNX1-213ENST00000561026 ZNF213O14771 459 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 CTAGE5O15320 804 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 RAG1P15918 1043 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 CDK7P50613 346 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 NSMFQ6X4W1 530 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 NOL8Q76FK4 1167 aaKnown RBP19.08■□□□□ 0.65
SNX1-213ENST00000561026 ESR2Q92731 530 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 DIAPH3Q9NSV4 1193 aa19.08■□□□□ 0.65
SNX1-213ENST00000561026 GNEQ9Y223 722 aaKnown RBP19.08■□□□□ 0.65
SNX1-213ENST00000561026 DDX49Q9Y6V7 483 aaKnown RBP19.08■□□□□ 0.65
SNX1-213ENST00000561026 ZNF543Q08ER8 600 aa19.07■□□□□ 0.64
SNX1-213ENST00000561026 SLC17A8Q8NDX2 589 aa19.07■□□□□ 0.64
SNX1-213ENST00000561026 VTI1AQ96AJ9 217 aa19.07■□□□□ 0.64
SNX1-213ENST00000561026 NEDD4P46934 1319 aa19.07■□□□□ 0.64
SNX1-213ENST00000561026 MROH7Q68CQ1 1323 aa19.07■□□□□ 0.64
SNX1-213ENST00000561026 HIP1O00291 1037 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 SNHG28P0DPA3 235 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 NT5C2P49902 561 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 BAATQ14032 418 aaPredicted RBP19.06■□□□□ 0.64
SNX1-213ENST00000561026 IQSEC1Q6DN90 963 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 TAPT1Q6NXT6 567 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 DGKHQ86XP1 1220 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 MORC4Q8TE76 937 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 PURBQ96QR8 312 aaKnown RBP19.06■□□□□ 0.64
SNX1-213ENST00000561026 PDGFCQ9NRA1 345 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
SNX1-213ENST00000561026 ARVCFO00192 962 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 NFIBO00712 420 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 SMPD1P17405 629 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 EPHB4P54760 987 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 BEX3Q00994 111 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 EEPD1Q7L9B9 569 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 TLK2Q86UE8 772 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 ZKSCAN3Q9BRR0 538 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 TBX21Q9UL17 535 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 PNMA2Q9UL42 364 aa19.06■□□□□ 0.64
SNX1-213ENST00000561026 TIMP1P01033 207 aa19.05■□□□□ 0.64
SNX1-213ENST00000561026 FPGSQ05932 587 aa19.05■□□□□ 0.64
SNX1-213ENST00000561026 FBXO16Q8IX29 292 aaPredicted RBP19.05■□□□□ 0.64
SNX1-213ENST00000561026 CLEC4DQ8WXI8 215 aa19.05■□□□□ 0.64
SNX1-213ENST00000561026 DSCC1Q9BVC3 393 aa19.05■□□□□ 0.64
SNX1-213ENST00000561026 VTA1Q9NP79 307 aa19.05■□□□□ 0.64
SNX1-213ENST00000561026 ADD3Q9UEY8 706 aaKnown RBP19.05■□□□□ 0.64
SNX1-213ENST00000561026 Q9Y3F1 56 aa19.05■□□□□ 0.64
SNX1-213ENST00000561026 DYNC1LI2O43237 492 aaPredicted RBP19.04■□□□□ 0.64
SNX1-213ENST00000561026 KDM4AO75164 1064 aa19.04■□□□□ 0.64
SNX1-213ENST00000561026 SMAD3P84022 425 aaKnown RBP19.04■□□□□ 0.64
SNX1-213ENST00000561026 FSCN1Q16658 493 aaKnown RBP19.04■□□□□ 0.64
SNX1-213ENST00000561026 CCDC178Q5BJE1 867 aa19.04■□□□□ 0.64
SNX1-213ENST00000561026 GPATCH4Q5T3I0 446 aaKnown RBP19.04■□□□□ 0.64
SNX1-213ENST00000561026 CXCL17Q6UXB2 119 aa19.04■□□□□ 0.64
SNX1-213ENST00000561026 IQCA1Q86XH1 822 aa19.04■□□□□ 0.64
SNX1-213ENST00000561026 AP5M1Q9H0R1 490 aa19.04■□□□□ 0.64
SNX1-213ENST00000561026 LOC102724159A0A0B4J2E5 919 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 PTPDC1A2A3K4 754 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 CABYRO75952 493 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 PTGS1P23219 599 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 ALDH5A1P51649 535 aaPredicted RBP19.03■□□□□ 0.64
SNX1-213ENST00000561026 PWP2Q15269 919 aaKnown RBP19.03■□□□□ 0.64
SNX1-213ENST00000561026 ZNF697Q5TEC3 545 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 KIAA1211Q6ZU35 1233 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 FAM126BQ8IXS8 530 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 ANKS1AQ92625 1134 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 RNPC3Q96LT9 517 aaKnown RBP19.03■□□□□ 0.64
SNX1-213ENST00000561026 FAM161BQ96MY7 647 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 GUCD1Q96NT3 240 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 CTNNA3Q9UI47 895 aa19.03■□□□□ 0.64
SNX1-213ENST00000561026 SUPT16HQ9Y5B9 1047 aaKnown RBP19.03■□□□□ 0.64
SNX1-213ENST00000561026 WDR19Q8NEZ3 1342 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 ZEB2O60315 1214 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 GOLGA8HP0CJ92 632 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 CALML3P27482 149 aa19.02■□□□□ 0.64
SNX1-213ENST00000561026 IMMTQ16891 758 aaKnown RBP19.02■□□□□ 0.64
SNX1-213ENST00000561026 TMEM63BQ5T3F8 832 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms