RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ECE1P42892 770 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 PPM1JQ5JR12 505 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 ZBTB37Q5TC79 503 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 NBPF6Q5VWK0 638 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 CST9Q5W186 159 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 NME9Q86XW9 330 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
HERC1-211ENST00000560983 HRASLS5Q96KN8 279 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 NBPF4Q96M43 638 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 ASAP1Q9ULH1 1129 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 COL6A3P12111 3177 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 MEGF6O75095 1541 aa5.43□□□□□ -1.54
HERC1-211ENST00000560983 VIRMAQ69YN4 1812 aaKnown RBP5.42□□□□□ -1.54
HERC1-211ENST00000560983 IQCA1LA6NCM1 817 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 POLRMTO00411 1230 aaKnown RBP5.42□□□□□ -1.54
HERC1-211ENST00000560983 BIN1O00499 593 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 RPS6KA4O75676 772 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 EOMESO95936 686 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 RFC4P35249 363 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 CD96P40200 585 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 AOC3Q16853 763 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 TPTE2Q6XPS3 522 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 SPACA3Q8IXA5 215 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 TTLL6Q8N841 843 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 LRRN4CLQ8ND94 238 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 SETDB2Q96T68 719 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 RC3H2Q9HBD1 1191 aaKnown RBP5.42□□□□□ -1.54
HERC1-211ENST00000560983 DDX21Q9NR30 783 aaKnown RBP eCLIP5.42□□□□□ -1.54
HERC1-211ENST00000560983 C5P01031 1676 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 PITPNM2Q9BZ72 1349 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 BRCA2P51587 3418 aa5.42□□□□□ -1.54
HERC1-211ENST00000560983 FBLN1P23142 703 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 CAP2P40123 477 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 GRM1Q13255 1194 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 NKPD1Q17RQ9 610 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 EAPPQ56P03 285 aaPredicted RBP5.41□□□□□ -1.54
HERC1-211ENST00000560983 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 ALG1LQ6GMV1 187 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 SLC23A3Q6PIS1 610 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 C22orf34Q6ZV56 151 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.41□□□□□ -1.54
HERC1-211ENST00000560983 C12orf49Q9H741 205 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 SRP68Q9UHB9 627 aaKnown RBP5.41□□□□□ -1.54
HERC1-211ENST00000560983 CYP8B1Q9UNU6 501 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 SAMM50Q9Y512 469 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 CGNL1Q0VF96 1302 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 VCANP13611 3396 aa5.41□□□□□ -1.54
HERC1-211ENST00000560983 DCDC2CA8MYV0 355 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 EPHX2P34913 555 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 LRRC14Q15048 493 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 ANGEL2Q5VTE6 544 aaKnown RBP5.4□□□□□ -1.54
HERC1-211ENST00000560983 LLGL2Q6P1M3 1020 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 USHBP1Q8N6Y0 703 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 KCT2Q8NC54 265 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 GAL3ST3Q96A11 431 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 CBX8Q9HC52 389 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 GTF2IRD1Q9UHL9 959 aa5.4□□□□□ -1.54
HERC1-211ENST00000560983 SBF1O95248 1867 aa5.4□□□□□ -1.55
HERC1-211ENST00000560983 BRCA1P38398 1863 aaKnown RBP5.4□□□□□ -1.55
HERC1-211ENST00000560983 UBR3Q6ZT12 1888 aa5.4□□□□□ -1.55
HERC1-211ENST00000560983 CENPJQ9HC77 1338 aaPredicted RBP5.4□□□□□ -1.55
HERC1-211ENST00000560983 DOT1LQ8TEK3 1739 aa5.4□□□□□ -1.55
HERC1-211ENST00000560983 KAT6BQ8WYB5 2073 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 CD163L1Q9NR16 1453 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 ARFGEF1Q9Y6D6 1849 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 LRIG2O94898 1065 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 CELA3AP09093 270 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 HOXC9P31274 260 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 PCNX4Q63HM2 1172 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 CIAPIN1Q6FI81 312 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 CYFIP1Q7L576 1253 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 PNMA8AQ86V59 439 aaPredicted RBP5.39□□□□□ -1.55
HERC1-211ENST00000560983 C12orf40Q86WS4 652 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 C2CD5Q86YS7 1000 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 ZSCAN29Q8IWY8 852 aaPredicted RBP5.39□□□□□ -1.55
HERC1-211ENST00000560983 PI4K2BQ8TCG2 481 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 TMEM40Q8WWA1 233 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 FAM168AQ92567 244 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 SSU72Q9NP77 194 aaKnown RBP5.39□□□□□ -1.55
HERC1-211ENST00000560983 FAM8A1Q9UBU6 413 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 HACL1Q9UJ83 578 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 MAPK8IP1Q9UQF2 711 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 MAP3K19Q56UN5 1328 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 PCDH11XQ9BZA7 1347 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 C4AP0C0L4 1744 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 KTN1Q86UP2 1357 aaKnown RBP5.39□□□□□ -1.55
HERC1-211ENST00000560983 SBNO2Q9Y2G9 1366 aa5.39□□□□□ -1.55
HERC1-211ENST00000560983 LTBP1Q14766 1721 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 TRAF5O00463 557 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 FBXO24O75426 580 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 SLITRK5O94991 958 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 MAPK8P45983 427 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 CLCN7P51798 805 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 PTPN11Q06124 597 aaPredicted RBP5.38□□□□□ -1.55
HERC1-211ENST00000560983 KCNA1Q09470 495 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 INPP5AQ14642 412 aa5.38□□□□□ -1.55
HERC1-211ENST00000560983 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms