RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 M0R296 226 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 ZAP70P43403 619 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 CLEC10AQ8IUN9 316 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 CPXCR1Q8N123 301 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 EDAQ92838 391 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
HERC1-210ENST00000560897 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
HERC1-210ENST00000560897 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
HERC1-210ENST00000560897 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
HERC1-210ENST00000560897 ASTN1O14525 1302 aa11.54□□□□□ -0.56
HERC1-210ENST00000560897 CACNA1HO95180 2353 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 ASB14A6NK59 587 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 ABCB7O75027 752 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 ZBED4O75132 1171 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 IQCF3P0C7M6 154 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 ID4P47928 161 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 WDR5P61964 334 aaKnown RBP11.53□□□□□ -0.56
HERC1-210ENST00000560897 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 SSH1Q8WYL5 1049 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 MRPL38Q96DV4 380 aaKnown RBP11.53□□□□□ -0.56
HERC1-210ENST00000560897 RAD9AQ99638 391 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 CRNKL1Q9BZJ0 848 aaKnown RBP11.53□□□□□ -0.56
HERC1-210ENST00000560897 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.53□□□□□ -0.56
HERC1-210ENST00000560897 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
HERC1-210ENST00000560897 PTPRSQ13332 1948 aa11.52□□□□□ -0.56
HERC1-210ENST00000560897 C5orf42Q9H799 3197 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 LINC01553A4QN01 128 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 AKR1B1P15121 316 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 LRRFIP1Q32MZ4 808 aaKnown RBP11.52□□□□□ -0.57
HERC1-210ENST00000560897 TMED8Q6PL24 325 aaPredicted RBP11.52□□□□□ -0.57
HERC1-210ENST00000560897 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 FBXL6Q8N531 539 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 BANK1Q8NDB2 785 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 CHST13Q8NET6 341 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
HERC1-210ENST00000560897 CCDC17Q96LX7 622 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 KATNBL1Q9H079 304 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 CLDND1Q9NY35 253 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 Q9Y3F1 56 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 RIPK3Q9Y572 518 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 FAM186AA6NE01 2351 aa11.52□□□□□ -0.57
HERC1-210ENST00000560897 MAGEB6P1A0A0J9YX57 407 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 NCK2O43639 380 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 GJB5O95377 273 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 MYL3P08590 195 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 EEF2P13639 858 aaKnown RBP11.51□□□□□ -0.57
HERC1-210ENST00000560897 SMPD1P17405 629 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
HERC1-210ENST00000560897 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
HERC1-210ENST00000560897 TMCO2Q7Z6W1 182 aaPredicted RBP11.51□□□□□ -0.57
HERC1-210ENST00000560897 MEIS3Q99687 375 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 KANSL2Q9H9L4 492 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 SMC4Q9NTJ3 1288 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 KMT2EQ8IZD2 1858 aa11.51□□□□□ -0.57
HERC1-210ENST00000560897 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 USP17L21D6R901 530 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 ATP2A1O14983 1001 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 EFCAB14O75071 495 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 GNAI3P08754 354 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 CPT1AP50416 773 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 DEFB103AP81534 67 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 IQSEC1Q6DN90 963 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 SIAH1Q8IUQ4 282 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 PRPF38AQ8NAV1 312 aaKnown RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 FGD4Q96M96 766 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 RAVER2Q9HCJ3 691 aaKnown RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
HERC1-210ENST00000560897 RIF1Q5UIP0 2472 aaKnown RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 TRIP12Q14669 1992 aaPredicted RBP11.5□□□□□ -0.57
HERC1-210ENST00000560897 SOWAHBA6NEL2 793 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 STXBP3O00186 592 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 KDM4AO75164 1064 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 PARNO95453 639 aaKnown RBP11.49□□□□□ -0.57
HERC1-210ENST00000560897 MTX1Q13505 466 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 SMAD2Q15796 467 aaKnown RBP11.49□□□□□ -0.57
HERC1-210ENST00000560897 TCEAL5Q5H9L2 206 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
HERC1-210ENST00000560897 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 AFAP1L1Q8TED9 768 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 DYNLL2Q96FJ2 89 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 SAMD11Q96NU1 681 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 C17orf80Q9BSJ5 609 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms