RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PLP2Q04941 152 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 SLC14A2Q15849 920 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 CLEC16AQ2KHT3 1053 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 OLFML2BQ68BL8 750 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 RNF111Q6ZNA4 994 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 TMC3Q7Z5M5 1100 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 USHBP1Q8N6Y0 703 aa7.06□□□□□ -1.28
PSMA4-221ENST00000560842 ZNF655Q8N720 491 aaPredicted RBP7.06□□□□□ -1.28
PSMA4-221ENST00000560842 MKRN2Q9H000 416 aaKnown RBP7.06□□□□□ -1.28
PSMA4-221ENST00000560842 A0A087WZG4 1122 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 CBFA2T2O43439 604 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 SLC7A5Q01650 507 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 CCDC144CPQ8IYA2 1237 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 MAP6Q96JE9 813 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 ACTR10Q9NZ32 417 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 ZMYM5Q9UJ78 669 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 PCDHB12Q9Y5F1 795 aa7.05□□□□□ -1.28
PSMA4-221ENST00000560842 INSRRP14616 1297 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 CD247P20963 164 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 SDHBP21912 280 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 ERVFRD-1P60508 538 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 RBL2Q08999 1139 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 PPP2R5EQ16537 467 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 GNPTABQ3T906 1256 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
PSMA4-221ENST00000560842 DCAF15Q66K64 600 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 CEP128Q6ZU80 1094 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 WAPLQ7Z5K2 1190 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 TP53I13Q8NBR0 393 aaPredicted RBP7.04□□□□□ -1.28
PSMA4-221ENST00000560842 HAUS7Q99871 368 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 TANGO6Q9C0B7 1094 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 KLHL25Q9H0H3 589 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 ASCC2Q9H1I8 757 aaPredicted RBP7.04□□□□□ -1.28
PSMA4-221ENST00000560842 GP6Q9HCN6 339 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 SUSD2Q9UGT4 822 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 MYRFQ9Y2G1 1151 aa7.04□□□□□ -1.28
PSMA4-221ENST00000560842 PRAMEF1O95521 474 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 ATP2B1P20020 1258 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 ZNF143P52747 638 aaPredicted RBP7.03□□□□□ -1.28
PSMA4-221ENST00000560842 NCAPHQ15003 741 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 LDHDQ86WU2 507 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 ZNF513Q8N8E2 541 aaPredicted RBP7.03□□□□□ -1.28
PSMA4-221ENST00000560842 LINC00116Q8NCU8 138 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 TCTN2Q96GX1 697 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 BDH2Q9BUT1 245 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 KLHL14Q9P2G3 628 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 PCDHB10Q9UN67 800 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 ZNF451Q9Y4E5 1061 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 FHOD1Q9Y613 1164 aa7.03□□□□□ -1.28
PSMA4-221ENST00000560842 TP53P04637 393 aaPredicted RBP7.02□□□□□ -1.29
PSMA4-221ENST00000560842 ZNF445P59923 1031 aa7.02□□□□□ -1.29
PSMA4-221ENST00000560842 SF3A1Q15459 793 aaKnown RBP7.02□□□□□ -1.29
PSMA4-221ENST00000560842 ANKS3Q6ZW76 656 aa7.02□□□□□ -1.29
PSMA4-221ENST00000560842 HHIPL1Q96JK4 782 aa7.02□□□□□ -1.29
PSMA4-221ENST00000560842 CHST7Q9NS84 486 aa7.02□□□□□ -1.29
PSMA4-221ENST00000560842 TMEM82A0PJX8 343 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 MPOP05164 745 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 CTSKP43235 329 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 CAP1Q01518 475 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 RAB33AQ14088 237 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 PUM1Q14671 1186 aaKnown RBP eCLIP7.01□□□□□ -1.29
PSMA4-221ENST00000560842 RTP5Q14D33 572 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 FXNQ16595 210 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 NBPF6Q5VWK0 638 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 KIAA1211LQ6NV74 962 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 HHIPL2Q6UWX4 724 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 FAM178BQ8IXR5 827 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 MICAL1Q8TDZ2 1067 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 SREK1Q8WXA9 508 aaKnown RBP7.01□□□□□ -1.29
PSMA4-221ENST00000560842 NBPF4Q96M43 638 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 PLCD4Q9BRC7 762 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 FOXP3Q9BZS1 431 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 WHRNQ9P202 907 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 FBXL21Q9UKT6 434 aa7.01□□□□□ -1.29
PSMA4-221ENST00000560842 CNOT11Q9UKZ1 510 aaKnown RBP7.01□□□□□ -1.29
PSMA4-221ENST00000560842 PRICKLE3O43900 615 aaPredicted RBP7□□□□□ -1.29
PSMA4-221ENST00000560842 STK10O94804 968 aaKnown RBP7□□□□□ -1.29
PSMA4-221ENST00000560842 BMP8BP34820 402 aa7□□□□□ -1.29
PSMA4-221ENST00000560842 TCEAL1Q15170 157 aa7□□□□□ -1.29
PSMA4-221ENST00000560842 ZFYVE27Q5T4F4 411 aa7□□□□□ -1.29
PSMA4-221ENST00000560842 C6orf15Q6UXA7 325 aaPredicted RBP7□□□□□ -1.29
PSMA4-221ENST00000560842 HNRNPLLQ8WVV9 542 aaKnown RBP7□□□□□ -1.29
PSMA4-221ENST00000560842 RCC1LQ96I51 464 aaKnown RBP7□□□□□ -1.29
PSMA4-221ENST00000560842 DIS3Q9Y2L1 958 aaKnown RBP7□□□□□ -1.29
PSMA4-221ENST00000560842 PCDHA5Q9Y5H7 936 aa7□□□□□ -1.29
PSMA4-221ENST00000560842 ANKRD34BA5PLL1 514 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 GSNP06396 782 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 EPHX1P07099 455 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 ITGA4P13612 1032 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 RTP1P59025 263 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 HEATR6Q6AI08 1181 aaKnown RBP6.99□□□□□ -1.29
PSMA4-221ENST00000560842 ARHGEF39Q8N4T4 335 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 CELF2-AS1Q8N7Q2 184 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 GPR20Q99678 358 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 TCFL5Q9UL49 500 aa6.99□□□□□ -1.29
PSMA4-221ENST00000560842 MINPP1Q9UNW1 487 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms