RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 KIF15Q9NS87 1388 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 NEO1Q92859 1461 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 ARHGEF5Q12774 1597 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 CROCC2H7BZ55 1655 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 NOTOA8MTQ0 251 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 SIGLEC6O43699 453 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 TSPAN15O95858 294 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 DNAJA1P31689 397 aaKnown RBP5.96□□□□□ -1.45
TMOD3-207ENST00000560549 SOX9P48436 509 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 CEBPAP49715 358 aaPredicted RBP5.96□□□□□ -1.45
TMOD3-207ENST00000560549 GALK1P51570 392 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 RBBP8NLQ8NC74 664 aaPredicted RBP5.96□□□□□ -1.45
TMOD3-207ENST00000560549 SLC38A3Q99624 504 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 MKRN2Q9H000 416 aaKnown RBP5.96□□□□□ -1.45
TMOD3-207ENST00000560549 GFOD1Q9NXC2 390 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 SUCOQ9UBS9 1254 aaKnown RBP5.96□□□□□ -1.45
TMOD3-207ENST00000560549 EFR3BQ9Y2G0 817 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 NUP155O75694 1391 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 PLCH2O75038 1416 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 KIAA1107Q9UPP5 1409 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 FANCAO15360 1455 aa5.96□□□□□ -1.45
TMOD3-207ENST00000560549 RPRD2Q5VT52 1461 aaKnown RBP5.96□□□□□ -1.45
TMOD3-207ENST00000560549 CDC42BPBQ9Y5S2 1711 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 CENPBP07199 599 aaPredicted RBP5.96□□□□□ -1.46
TMOD3-207ENST00000560549 RAC2P15153 192 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 HSPA2P54652 639 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 NR0B2Q15466 257 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 CLEC16AQ2KHT3 1053 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 FBXW10Q5XX13 1052 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 DCAF15Q66K64 600 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 INTS3Q68E01 1043 aaKnown RBP5.96□□□□□ -1.46
TMOD3-207ENST00000560549 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 TAB3Q8N5C8 712 aaPredicted RBP5.96□□□□□ -1.46
TMOD3-207ENST00000560549 DAGLBQ8NCG7 672 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 PDZD8Q8NEN9 1154 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 ABHD4Q8TB40 342 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 LINC01599Q8WXQ3 324 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 SPATA32Q96LK8 384 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 TANGO6Q9C0B7 1094 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 RNF32Q9H0A6 362 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 LTBP3Q9NS15 1303 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 ARAP3Q8WWN8 1544 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 SYCP2Q9BX26 1530 aa5.96□□□□□ -1.46
TMOD3-207ENST00000560549 ADGBQ8N7X0 1667 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 PREX2Q70Z35 1606 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 SPATA31D1Q6ZQQ2 1576 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 ARHGAP5Q13017 1502 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 TRAPPC8Q9Y2L5 1435 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 MEIS1O00470 390 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 ARID5AQ03989 594 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 AUHQ13825 339 aaKnown RBP5.95□□□□□ -1.46
TMOD3-207ENST00000560549 PKN1Q16512 942 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 SPOCD1Q6ZMY3 1216 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 ENOX1Q8TC92 643 aaKnown RBP5.95□□□□□ -1.46
TMOD3-207ENST00000560549 MYLIPQ8WY64 445 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 TM9SF2Q99805 663 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 FAM86C1Q9NVL1 165 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
TMOD3-207ENST00000560549 FKTNO75072 461 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 IMPDH2P12268 514 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 GUCY2CP25092 1073 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 CHMP4BP1P59074 171 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 SF3A1Q15459 793 aaKnown RBP5.94□□□□□ -1.46
TMOD3-207ENST00000560549 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 AXDND1Q5T1B0 1012 aaPredicted RBP5.94□□□□□ -1.46
TMOD3-207ENST00000560549 EFCAB2Q5VUJ9 269 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 CRTC3Q6UUV7 619 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 MPZL3Q6UWV2 235 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 ZNF655Q8N720 491 aaPredicted RBP5.94□□□□□ -1.46
TMOD3-207ENST00000560549 DHX38Q92620 1227 aaKnown RBP5.94□□□□□ -1.46
TMOD3-207ENST00000560549 SHISA4Q96DD7 197 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 PPP1R16BQ96T49 567 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
TMOD3-207ENST00000560549 PLEKHH2Q8IVE3 1493 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 WASHC2AQ641Q2 1341 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 PPM1GO15355 546 aaPredicted RBP5.93□□□□□ -1.46
TMOD3-207ENST00000560549 PSPNO60542 156 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 USP2O75604 605 aaPredicted RBP5.93□□□□□ -1.46
TMOD3-207ENST00000560549 SYPP08247 313 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 PMS1P54277 932 aaKnown RBP5.93□□□□□ -1.46
TMOD3-207ENST00000560549 GNL2Q13823 731 aaKnown RBP5.93□□□□□ -1.46
TMOD3-207ENST00000560549 C1QL4Q86Z23 238 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 LILRA2Q8N149 483 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 AFAP1Q8N556 730 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 FAM169BQ8N8A8 192 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 FBXO15Q8NCQ5 510 aaPredicted RBP5.93□□□□□ -1.46
TMOD3-207ENST00000560549 SHDQ96IW2 340 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 PCDHB12Q9Y5F1 795 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 RICTORQ6R327 1708 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 KDM5DQ9BY66 1539 aa5.93□□□□□ -1.46
TMOD3-207ENST00000560549 CBFA2T2O43439 604 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
TMOD3-207ENST00000560549 RAPGEF3O95398 923 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 MED14OSP0DP75 135 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
TMOD3-207ENST00000560549 GIPRP48546 466 aa5.92□□□□□ -1.46
TMOD3-207ENST00000560549 NASPP49321 788 aaPredicted RBP5.92□□□□□ -1.46
TMOD3-207ENST00000560549 KIR3DS1Q14943 382 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms