RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 SH3TC2Q8TF17 1288 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 TXNRD2Q9NNW7 524 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 FBXO28Q9NVF7 368 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
LRRC28-219ENST00000560483 LAMA4Q16363 1823 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 DOCK3Q8IZD9 2030 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 PLIN4Q96Q06 1357 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 FRMPD2Q68DX3 1309 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-219ENST00000560483 IGKV6D-41A0A0C4DH26 115 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 TOP1P11387 765 aaKnown RBP9.38□□□□□ -0.91
LRRC28-219ENST00000560483 CTGFP29279 349 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 GRK4P32298 578 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 STAT2P52630 851 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 Q3C1V9 767 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 IFIT1BQ5T764 474 aaKnown RBP9.38□□□□□ -0.91
LRRC28-219ENST00000560483 PLEKHH3Q7Z736 793 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 DPP9Q86TI2 863 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 MB21D1Q8N884 522 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 NCOA7Q8NI08 942 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 CHURC1Q8WUH1 139 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 TMEM47Q9BQJ4 181 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 GPCPD1Q9NPB8 672 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 IL17RBQ9NRM6 502 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 RBPJLQ9UBG7 517 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 FEM1BQ9UK73 627 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 PPP1R9AQ9ULJ8 1098 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 GABRQQ9UN88 632 aa9.38□□□□□ -0.91
LRRC28-219ENST00000560483 CENPFP49454 3210 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 TNKSO95271 1327 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 GREB1LQ9C091 1923 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-219ENST00000560483 IFIT3O14879 490 aaKnown RBP9.37□□□□□ -0.91
LRRC28-219ENST00000560483 ADCY3O60266 1144 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 CYP21A2P08686 494 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 ELNP15502 786 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 FGD1P98174 961 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 CAP1Q01518 475 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 CCDC174Q6PII3 467 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 NFXL1Q6ZNB6 911 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 CHST3Q7LGC8 479 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 GPR142Q7Z601 462 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 PRPF38AQ8NAV1 312 aaKnown RBP9.37□□□□□ -0.91
LRRC28-219ENST00000560483 GMCL1P1Q8NEA9 526 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 SOCS4Q8WXH5 440 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 MKL1Q969V6 931 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-219ENST00000560483 SPATC1LQ9H0A9 340 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 PORCNQ9H237 461 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 HOMER2Q9NSB8 354 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 BTBD7Q9P203 1132 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 MORF4L1Q9UBU8 362 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 TACC3Q9Y6A5 838 aa9.37□□□□□ -0.91
LRRC28-219ENST00000560483 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 E7EWF7 191 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 VWA5AO00534 786 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 ZKSCAN1P17029 563 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 ERCC3P19447 782 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 STAT3P40763 770 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 RGS2P41220 211 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 SNAP25P60880 206 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 KCTD2Q14681 263 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 WTAPQ15007 396 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 SNRNP48Q6IEG0 339 aaKnown RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 LBX2Q6XYB7 198 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 FAM160B2Q86V87 743 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 PNMA1Q8ND90 353 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 DCAF4Q8WV16 495 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 MAP4K1Q92918 833 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 TTC14Q96N46 770 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 MMP19Q99542 508 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 MOV10L1Q9BXT6 1211 aaKnown RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 RAVER2Q9HCJ3 691 aaKnown RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 TCP11L1Q9NUJ3 509 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 SLC5A4Q9NY91 659 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 ZSWIM5Q9P217 1185 aa9.36□□□□□ -0.91
LRRC28-219ENST00000560483 GMPR2Q9P2T1 348 aaKnown RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 NAP1L2Q9ULW6 460 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-219ENST00000560483 SLC27A2O14975 620 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 CNMDO75829 334 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 REC8O95072 547 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 SLC25A27O95847 323 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 FGRP09769 529 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 FCER1AP12319 257 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 SLC16A2P36021 539 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 NT5C2P49902 561 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 TMEM132BQ14DG7 1078 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 RASGRP2Q7LDG7 609 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 DGKHQ86XP1 1220 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 DDX11Q96FC9 970 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 GMCL1Q96IK5 515 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 TEX13BQ9BXU2 312 aa9.35□□□□□ -0.91
LRRC28-219ENST00000560483 LSG1Q9H089 658 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms