RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZC3H18Q86VM9 953 aaKnown RBP15.05■□□□□ -0
CSPG4P12-202ENST00000559989 NCLNQ969V3 563 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 FIS1Q9Y3D6 152 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 TOM1L1O75674 476 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 TMCC1O94876 653 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 HNRNPCP07910 306 aaKnown RBP eCLIP15.05■□□□□ -0
CSPG4P12-202ENST00000559989 ACTN1P12814 892 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 KIF22Q14807 665 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 KRT25Q7Z3Z0 450 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 PHF21AQ96BD5 680 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 HESX1Q9UBX0 185 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 KRT87PA6NCN2 255 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 GOLGA8RI6L899 631 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 ZBED4O75132 1171 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 ESRRAP11474 423 aaPredicted RBP15.05■□□□□ -0
CSPG4P12-202ENST00000559989 RWDD2BP57060 319 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 LRRC8BQ6P9F7 803 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 RFX6Q8HWS3 928 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 RYBPQ8N488 228 aaPredicted RBP15.05■□□□□ -0
CSPG4P12-202ENST00000559989 ABHD8Q96I13 439 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 LMCD1Q9NZU5 365 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 L3MBTL1Q9Y468 752 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 SLC4A7Q9Y6M7 1214 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 KLC2Q9H0B6 622 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 IQSEC3Q9UPP2 1182 aaPredicted RBP15.04■□□□□ -0
CSPG4P12-202ENST00000559989 IL16Q14005 1332 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 OCRLQ01968 901 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 TRIM67Q6ZTA4 783 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 DEPTORQ8TB45 409 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 SAAL1Q96ER3 474 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 ADCY7P51828 1080 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 CCDC15Q0P6D6 951 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 C9orf84Q5VXU9 1444 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 CCDC78A2IDD5 438 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 MCF2LO15068 1137 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 NUDCD1Q96RS6 583 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 TRPV6Q9H1D0 765 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 CPSF3Q9UKF6 684 aaKnown RBP15.04■□□□□ -0
CSPG4P12-202ENST00000559989 ORC4O43929 436 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 STAT2P52630 851 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 LRMPQ12912 555 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 DCTN3O75935 186 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 CEP78Q5JTW2 689 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 CABP7Q86V35 215 aa15.04■□□□□ -0
CSPG4P12-202ENST00000559989 ARHGAP10A1A4S6 786 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 TADA3O75528 432 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 SLC9A1P19634 815 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 PSMD7P51665 324 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 FAM180AQ6UWF9 173 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 SH3GL2Q99962 352 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 FAM207AQ9NSI2 230 aaPredicted RBP15.03■□□□□ -0
CSPG4P12-202ENST00000559989 SLC12A6Q9UHW9 1150 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 PCDHB13Q9Y5F0 798 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 H0YCG3 227 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 RPS6KB1P23443 525 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 PIK3CAP42336 1068 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 MRPS26Q9BYN8 205 aaKnown RBP15.03■□□□□ -0
CSPG4P12-202ENST00000559989 SLC9A5Q14940 896 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 TJAP1Q5JTD0 557 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 PODNQ7Z5L7 613 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 ACRBPQ8NEB7 543 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 OLFM3Q96PB7 478 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 HSPA6P17066 643 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 TMED2Q15363 201 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 DYMQ7RTS9 669 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
CSPG4P12-202ENST00000559989 KSR1Q8IVT5 923 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 OR8K1Q8NGG5 319 aa15.03■□□□□ -0
CSPG4P12-202ENST00000559989 SMCO2A6NFE2 343 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 SOX5P35711 763 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 IFRD2Q12894 506 aaPredicted RBP15.02■□□□□ -0
CSPG4P12-202ENST00000559989 PTK2BQ14289 1009 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 CDC26Q8NHZ8 85 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 BUB1O43683 1085 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 RANBP1P43487 201 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 LIG4P49917 911 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 ZBTB8OSQ8IWT0 167 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 METTL13Q8N6R0 699 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 NOP53Q9NZM5 478 aaKnown RBP15.02■□□□□ -0
CSPG4P12-202ENST00000559989 PAIP2BQ9ULR5 123 aaKnown RBP15.02■□□□□ -0
CSPG4P12-202ENST00000559989 DENND2AQ9ULE3 1009 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 TRIM33Q9UPN9 1127 aa15.02■□□□□ -0
CSPG4P12-202ENST00000559989 KCNJ18B7U540 433 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 CFLARO15519 480 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 KCNJ12Q14500 433 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 DHX38Q92620 1227 aaKnown RBP15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 TRIM11Q96F44 468 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 CAB39Q9Y376 341 aaPredicted RBP15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 KDM2BQ8NHM5 1336 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 TAC1P20366 129 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 ARHGAP18Q8N392 663 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 MAML1Q92585 1016 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 ASPSCR1Q9BZE9 553 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 NSD2O96028 1365 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 SYNJ2O15056 1496 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 ZNF233A6NK53 670 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 ATP5HO75947 161 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 HSPA1AP0DMV8 641 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms