RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 TICAM2Q86XR7 235 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 DCAF4Q8WV16 495 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 TOX2Q96NM4 488 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 TRERF1Q96PN7 1200 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 STARD7Q9NQZ5 370 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 NEDD4P46934 1319 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 ASGR1P07306 291 aa22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 C6orf222P0C671 652 aaPredicted RBP22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 SLC16A2P36021 539 aa22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 MORC4Q8TE76 937 aa22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 TTYH1Q9H313 450 aaPredicted RBP22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 TCP11L1Q9NUJ3 509 aa22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 CTDP1Q9Y5B0 961 aaPredicted RBP22.21■■□□□ 1.15
CDC42BPB-206ENST00000559790 ICAM1P05362 532 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 SNHG28P0DPA3 235 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 PDHBP11177 359 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 PPP4R3BQ5MIZ7 849 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 TAPT1Q6NXT6 567 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 OSBPL3Q9H4L5 887 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 PDGFCQ9NRA1 345 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 MTMR7Q9Y216 660 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 ELP1O95163 1332 aa22.2■■□□□ 1.14
CDC42BPB-206ENST00000559790 PTPRSQ13332 1948 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 NFIBO00712 420 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 BEX3Q00994 111 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 NUCB1Q02818 461 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 IKQ13123 557 aaPredicted RBP22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 FAM126BQ8IXS8 530 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 SLC17A8Q8NDX2 589 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 FAM161BQ96MY7 647 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 IL25Q9H293 177 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 GRIN2DO15399 1336 aa22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 FRMPD2Q68DX3 1309 aaPredicted RBP22.19■■□□□ 1.14
CDC42BPB-206ENST00000559790 TOP1P11387 765 aaKnown RBP22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 SMPD1P17405 629 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 CCDC96Q2M329 555 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 RRP12Q5JTH9 1297 aaKnown RBP22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 SYDE2Q5VT97 1194 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 FBXO16Q8IX29 292 aaPredicted RBP22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 SLC43A3Q8NBI5 491 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 EXOC6Q8TAG9 804 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 NUP133Q8WUM0 1156 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 CCPG1Q9ULG6 757 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 MYH7BA7E2Y1 1941 aa22.18■■□□□ 1.14
CDC42BPB-206ENST00000559790 SDSP20132 328 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 SMAD3P84022 425 aaKnown RBP22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 AKNAD1Q5T1N1 836 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 SLC30A10Q6XR72 485 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 C16orf59Q7L2K0 433 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 CHD1LQ86WJ1 897 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 TET1Q8NFU7 2136 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 TMEM39AQ9NV64 488 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 TRIP12Q14669 1992 aaPredicted RBP22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 VCANP13611 3396 aa22.17■■□□□ 1.14
CDC42BPB-206ENST00000559790 BAZ2BQ9UIF8 2168 aaKnown RBP22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 CD4P01730 458 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 RAG1P15918 1043 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 TNFAIP2Q03169 654 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 FPGSQ05932 587 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 ZNF543Q08ER8 600 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 AAMPQ13685 434 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 GNASQ5JWF2 1037 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 B4GALNT3Q6L9W6 998 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 TLK2Q86UE8 772 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 GLT1D1Q96MS3 346 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 GPCPD1Q9NPB8 672 aa22.16■■□□□ 1.14
CDC42BPB-206ENST00000559790 REV3LO60673 3130 aa22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 ASB14A6NK59 587 aa22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 ARVCFO00192 962 aa22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 NSMFQ6X4W1 530 aa22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 PCSK9Q8NBP7 692 aaKnown RBP22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
CDC42BPB-206ENST00000559790 A0A0U1RQG5 324 aaPredicted RBP22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 DCDC2CA8MYV0 355 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 TRIM6-TRIM34B2RNG4 842 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 TIMP1P01033 207 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 ALDH5A1P51649 535 aaPredicted RBP22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 BAATQ14032 418 aaPredicted RBP22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 ZNF697Q5TEC3 545 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 RASIP1Q5U651 963 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 CXCL17Q6UXB2 119 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 EEPD1Q7L9B9 569 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 RILPL2Q969X0 211 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 VWCEQ96DN2 955 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 RNPC3Q96LT9 517 aaKnown RBP22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 CDX2Q99626 313 aaPredicted RBP22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 CPVLQ9H3G5 476 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 TOMM22Q9NS69 142 aa22.14■■□□□ 1.13
CDC42BPB-206ENST00000559790 UMODL1Q5DID0 1318 aa22.13■■□□□ 1.13
CDC42BPB-206ENST00000559790 SPTBN5Q9NRC6 3674 aaKnown RBP22.13■■□□□ 1.13
CDC42BPB-206ENST00000559790 SEMA6BQ9H3T3 888 aa22.13■■□□□ 1.13
CDC42BPB-206ENST00000559790 MROH7Q68CQ1 1323 aa22.12■■□□□ 1.13
CDC42BPB-206ENST00000559790 WDR19Q8NEZ3 1342 aa22.12■■□□□ 1.13
CDC42BPB-206ENST00000559790 PCP11498 1178 aaKnown RBP22.12■■□□□ 1.13
CDC42BPB-206ENST00000559790 FSCN1Q16658 493 aaKnown RBP22.12■■□□□ 1.13
CDC42BPB-206ENST00000559790 MFSD5Q6N075 450 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms