RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 IL17RBQ9NRM6 502 aa15.53■□□□□ 0.08
TPM1-220ENST00000559556 ISY1Q9ULR0 285 aaKnown RBP15.53■□□□□ 0.08
TPM1-220ENST00000559556 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.52■□□□□ 0.08
TPM1-220ENST00000559556 SOWAHBA6NEL2 793 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 ASB14A6NK59 587 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 TSPY2A6NKD2 308 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 ARVCFO00192 962 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 MCCP23508 829 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 NOVP48745 357 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 PPIGQ13427 754 aaKnown RBP eCLIP15.52■□□□□ 0.081e-7■■□□□ 14.5
TPM1-220ENST00000559556 RASIP1Q5U651 963 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 CCDC129Q6ZRS4 1044 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 TRERF1Q96PN7 1200 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 ANAPC4Q9UJX5 808 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 STX8Q9UNK0 236 aa15.52■□□□□ 0.08
TPM1-220ENST00000559556 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
TPM1-220ENST00000559556 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
TPM1-220ENST00000559556 TLR3O15455 904 aaKnown RBP15.51■□□□□ 0.07
TPM1-220ENST00000559556 NMT2O60551 498 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 CD4P01730 458 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 ALAS1P13196 640 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 TNFAIP2Q03169 654 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 RCSD1Q6JBY9 416 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 CCDC174Q6PII3 467 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 RASGRP2Q7LDG7 609 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 TLK2Q86UE8 772 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 SLC43A3Q8NBI5 491 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 CYP39A1Q9NYL5 469 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 PRR12Q9ULL5 1215 aa15.51■□□□□ 0.07
TPM1-220ENST00000559556 GNEQ9Y223 722 aaKnown RBP15.51■□□□□ 0.07
TPM1-220ENST00000559556 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
TPM1-220ENST00000559556 ORC4O43929 436 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 FGRP09769 529 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 BEX3Q00994 111 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 MUM1L1Q5H9M0 696 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 TMEM240Q5SV17 173 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 PSRC1Q6PGN9 363 aaPredicted RBP15.5■□□□□ 0.07
TPM1-220ENST00000559556 C16orf59Q7L2K0 433 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 VTI1AQ96AJ9 217 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 SIP14410 1827 aa15.5■□□□□ 0.07
TPM1-220ENST00000559556 ZMYM6O95789 1325 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 NLRC5Q86WI3 1866 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 CABYRO75952 493 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 CSF2RAP15509 400 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 ALX1Q15699 326 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 FSCN1Q16658 493 aaKnown RBP15.49■□□□□ 0.07
TPM1-220ENST00000559556 VPS53Q5VIR6 699 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 TMEM199Q8N511 208 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 MORC4Q8TE76 937 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 DCAF4Q8WV16 495 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 CHMP4CQ96CF2 233 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 INCENPQ9NQS7 918 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 CCPG1Q9ULG6 757 aa15.49■□□□□ 0.07
TPM1-220ENST00000559556 RANBP6O60518 1105 aaKnown RBP15.48■□□□□ 0.07
TPM1-220ENST00000559556 ICAM1P05362 532 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 GRIN2CQ14957 1233 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 TAPT1Q6NXT6 567 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 CXCL17Q6UXB2 119 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 BTNL9Q6UXG8 535 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 TIFAQ96CG3 184 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 EVI5LQ96CN4 794 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 SEZ6LQ9BYH1 1024 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 PPP1R12CQ9BZL4 782 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 RANBP17Q9H2T7 1088 aaKnown RBP15.48■□□□□ 0.07
TPM1-220ENST00000559556 ZNF576Q9H609 170 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 VTA1Q9NP79 307 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 Q9Y3F1 56 aa15.48■□□□□ 0.07
TPM1-220ENST00000559556 DDX49Q9Y6V7 483 aaKnown RBP15.48■□□□□ 0.07
TPM1-220ENST00000559556 GRIN2DO15399 1336 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 SMPD1P17405 629 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 CYP2C18P33260 490 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 SNAP25P60880 206 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
TPM1-220ENST00000559556 CCDC96Q2M329 555 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 IQSEC1Q6DN90 963 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
TPM1-220ENST00000559556 TICAM2Q86XR7 235 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 FBXO16Q8IX29 292 aaPredicted RBP15.47■□□□□ 0.07
TPM1-220ENST00000559556 AP5M1Q9H0R1 490 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 IL23AQ9NPF7 189 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
TPM1-220ENST00000559556 PTGS1P23219 599 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 PDE1AP54750 535 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 ITGA7Q13683 1181 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 ZNF365Q70YC5 407 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 PBX4Q9BYU1 374 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 LOXHD1Q8IVV2 1947 aa15.46■□□□□ 0.07
TPM1-220ENST00000559556 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 ZEB2O60315 1214 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 FGAP02671 866 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 ACRP10323 421 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 TOP1P11387 765 aaKnown RBP15.45■□□□□ 0.06
TPM1-220ENST00000559556 PBX2P40425 430 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 RRP1P56182 461 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms