RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CYP4F22Q6NT55 531 aa20.76■□□□□ 0.91
CLPX-203ENST00000558958 BLIDQ8IZY5 108 aa20.76■□□□□ 0.91
CLPX-203ENST00000558958 RIC8AQ9NPQ8 531 aa20.76■□□□□ 0.91
CLPX-203ENST00000558958 ADAMTS3O15072 1205 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 CYP2C8P10632 490 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 ADCY7P51828 1080 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 NR5A1Q13285 461 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 PAXIP1Q6ZW49 1069 aaPredicted RBP20.75■□□□□ 0.91
CLPX-203ENST00000558958 TNPO1Q92973 898 aaKnown RBP20.75■□□□□ 0.91
CLPX-203ENST00000558958 GLT8D2Q9H1C3 349 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 PSTPIP2Q9H939 334 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 ZCCHC17Q9NP64 241 aaKnown RBP20.75■□□□□ 0.91
CLPX-203ENST00000558958 BTBD7Q9P203 1132 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 MRPL11Q9Y3B7 192 aaKnown RBP20.75■□□□□ 0.91
CLPX-203ENST00000558958 A0A0G2JMZ2 1700 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 SMCHD1A6NHR9 2005 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 M0R2N6 131 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 IGF2BP3O00425 579 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLPX-203ENST00000558958 OPLAHO14841 1288 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 GNL2Q13823 731 aaKnown RBP20.75■□□□□ 0.91
CLPX-203ENST00000558958 BICD2Q8TD16 824 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 GTF3C2Q8WUA4 911 aaPredicted RBP20.75■□□□□ 0.91
CLPX-203ENST00000558958 CUL5Q93034 780 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 TNFRSF25Q93038 417 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 TEX13BQ9BXU2 312 aa20.75■□□□□ 0.91
CLPX-203ENST00000558958 COL11A1P12107 1806 aaPredicted RBP20.74■□□□□ 0.91
CLPX-203ENST00000558958 CNMDO75829 334 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 ALAS1P13196 640 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 STAT3P40763 770 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 MRPL12P52815 198 aaKnown RBP20.74■□□□□ 0.91
CLPX-203ENST00000558958 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 SNRNP48Q6IEG0 339 aaKnown RBP20.74■□□□□ 0.91
CLPX-203ENST00000558958 BRAPQ7Z569 592 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 NOSTRINQ8IVI9 506 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 CAPNS2Q96L46 248 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 ZIC5Q96T25 663 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 RBPJLQ9UBG7 517 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 RABGAP1Q9Y3P9 1069 aa20.74■□□□□ 0.91
CLPX-203ENST00000558958 TM4SF4P48230 202 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 NOGQ13253 232 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 GRM1Q13255 1194 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 IFNL1Q8IU54 200 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 TEX2Q8IWB9 1127 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 CLEC4DQ8WXI8 215 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 PARK7Q99497 189 aaKnown RBP20.73■□□□□ 0.91
CLPX-203ENST00000558958 TXNRD2Q9NNW7 524 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 PCDHA6Q9UN73 950 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 RIPK3Q9Y572 518 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 PCDHA8Q9Y5H6 950 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 ATP6V1DQ9Y5K8 247 aa20.73■□□□□ 0.91
CLPX-203ENST00000558958 PEX10O60683 326 aa20.72■□□□□ 0.91
CLPX-203ENST00000558958 PLS1Q14651 629 aa20.72■□□□□ 0.91
CLPX-203ENST00000558958 TKFCQ3LXA3 575 aa20.72■□□□□ 0.91
CLPX-203ENST00000558958 REXO1Q8N1G1 1221 aaKnown RBP20.72■□□□□ 0.91
CLPX-203ENST00000558958 RASGRP4Q8TDF6 673 aa20.72■□□□□ 0.91
CLPX-203ENST00000558958 SMCR8Q8TEV9 937 aaPredicted RBP20.72■□□□□ 0.91
CLPX-203ENST00000558958 TRERF1Q96PN7 1200 aa20.72■□□□□ 0.91
CLPX-203ENST00000558958 PAGR1Q9BTK6 254 aa20.72■□□□□ 0.91
CLPX-203ENST00000558958 MEIS2O14770 477 aa20.71■□□□□ 0.91
CLPX-203ENST00000558958 CLK2P49760 499 aaKnown RBP20.71■□□□□ 0.91
CLPX-203ENST00000558958 MUM1L1Q5H9M0 696 aa20.71■□□□□ 0.91
CLPX-203ENST00000558958 FAM173BQ6P4H8 233 aa20.71■□□□□ 0.91
CLPX-203ENST00000558958 SPATC1LQ9H0A9 340 aa20.71■□□□□ 0.91
CLPX-203ENST00000558958 HOMER2Q9NSB8 354 aa20.71■□□□□ 0.91
CLPX-203ENST00000558958 BIN2Q9UBW5 565 aaPredicted RBP20.71■□□□□ 0.91
CLPX-203ENST00000558958 PIK3CDO00329 1044 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 NFIBO00712 420 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 GCLCP48506 637 aaPredicted RBP20.7■□□□□ 0.9
CLPX-203ENST00000558958 UBE2SQ16763 222 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 NOM1Q5C9Z4 860 aaKnown RBP20.7■□□□□ 0.9
CLPX-203ENST00000558958 EARS2Q5JPH6 523 aaKnown RBP20.7■□□□□ 0.9
CLPX-203ENST00000558958 USP17L6PQ6QN14 398 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 RIOX2Q8IUF8 465 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 TBC1D5Q92609 795 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 RNF146Q9NTX7 359 aa20.7■□□□□ 0.9
CLPX-203ENST00000558958 GHRHRQ02643 423 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 FOXD4L6Q3SYB3 417 aaPredicted RBP20.69■□□□□ 0.9
CLPX-203ENST00000558958 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 JAKMIP3Q5VZ66 844 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 FOXD4L3Q6VB84 417 aaPredicted RBP20.69■□□□□ 0.9
CLPX-203ENST00000558958 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 TMEM260Q9NX78 707 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 CCDC194A0A1B0GVG4 234 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 FAM205CA6NFA0 338 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 GCOM1H8Y6P7 765 aaPredicted RBP20.69■□□□□ 0.9
CLPX-203ENST00000558958 AOC2O75106 756 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 CFBP00751 764 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 POLR2MP0CAP2 368 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 ERVK-9P63128 1117 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 ERVK-24P63145 666 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 Q3C1V9 767 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 CLEC17AQ6ZS10 378 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 PIK3AP1Q6ZUJ8 805 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 SAMD3Q8N6K7 520 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 CHAMP1Q96JM3 812 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 MOV10L1Q9BXT6 1211 aaKnown RBP20.69■□□□□ 0.9
CLPX-203ENST00000558958 MORF4L1Q9UBU8 362 aa20.69■□□□□ 0.9
CLPX-203ENST00000558958 SLC25A27O95847 323 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 HOXA13P31271 388 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms