RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 GOLGA6L22H0YM25 854 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 OSBPP22059 807 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 MOGSQ13724 837 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 MYSM1Q5VVJ2 828 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 ATL3Q6DD88 541 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 RGMBQ6NW40 437 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 ADAMTS5Q9UNA0 930 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 MRPL11Q9Y3B7 192 aaKnown RBP27.36■■□□□ 1.97
MEIS3-204ENST00000558555 CCL15-CCL14A0A0B4J2E2 113 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 CCL15Q16663 113 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 CPXCR1Q8N123 301 aa27.36■■□□□ 1.97
MEIS3-204ENST00000558555 REXO1Q8N1G1 1221 aaKnown RBP27.36■■□□□ 1.97
MEIS3-204ENST00000558555 COL11A1P12107 1806 aaPredicted RBP27.35■■□□□ 1.97
MEIS3-204ENST00000558555 SPDYE16A6NNV3 312 aaPredicted RBP27.35■■□□□ 1.97
MEIS3-204ENST00000558555 MS4A4AQ96JQ5 239 aa27.35■■□□□ 1.97
MEIS3-204ENST00000558555 RAVER2Q9HCJ3 691 aaKnown RBP27.35■■□□□ 1.97
MEIS3-204ENST00000558555 CFAP45Q9UL16 551 aa27.35■■□□□ 1.97
MEIS3-204ENST00000558555 CCDC194A0A1B0GVG4 234 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 OAZ1P54368 228 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 GPAT2Q6NUI2 795 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 RASAL3Q86YV0 1011 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 TNFRSF25Q93038 417 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 HHIPL1Q96JK4 782 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 CHAMP1Q96JM3 812 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 AGBL1Q96MI9 1066 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 ASCC2Q9H1I8 757 aaPredicted RBP27.34■■□□□ 1.97
MEIS3-204ENST00000558555 ZNF536O15090 1300 aa27.34■■□□□ 1.97
MEIS3-204ENST00000558555 KRT25Q7Z3Z0 450 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 MB21D1Q8N884 522 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 PNMA3Q9UL41 463 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 NOL7Q9UMY1 257 aaKnown RBP27.33■■□□□ 1.97
MEIS3-204ENST00000558555 PCDHA6Q9UN73 950 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 PCDHA8Q9Y5H6 950 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 SMCHD1A6NHR9 2005 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 THSD7BQ9C0I4 1608 aa27.33■■□□□ 1.97
MEIS3-204ENST00000558555 TEX2Q8IWB9 1127 aa27.33■■□□□ 1.96
MEIS3-204ENST00000558555 RASGRP4Q8TDF6 673 aa27.33■■□□□ 1.96
MEIS3-204ENST00000558555 CNPY2Q9Y2B0 182 aa27.33■■□□□ 1.96
MEIS3-204ENST00000558555 M0R2N6 131 aa27.32■■□□□ 1.96
MEIS3-204ENST00000558555 CSPP1Q1MSJ5 1256 aa27.32■■□□□ 1.96
MEIS3-204ENST00000558555 RILPL1Q5EBL4 403 aa27.32■■□□□ 1.96
MEIS3-204ENST00000558555 PIK3AP1Q6ZUJ8 805 aa27.32■■□□□ 1.96
MEIS3-204ENST00000558555 ZIC5Q96T25 663 aa27.32■■□□□ 1.96
MEIS3-204ENST00000558555 P2RX7Q99572 595 aaKnown RBP27.32■■□□□ 1.96
MEIS3-204ENST00000558555 TFIP11Q9UBB9 837 aaKnown RBP27.32■■□□□ 1.96
MEIS3-204ENST00000558555 BIN2Q9UBW5 565 aaPredicted RBP27.32■■□□□ 1.96
MEIS3-204ENST00000558555 SLC45A1Q9Y2W3 748 aa27.32■■□□□ 1.96
MEIS3-204ENST00000558555 MCM4P33991 863 aa27.31■■□□□ 1.96
MEIS3-204ENST00000558555 REPS2Q8NFH8 660 aa27.31■■□□□ 1.96
MEIS3-204ENST00000558555 BRI3BPQ8WY22 251 aa27.31■■□□□ 1.96
MEIS3-204ENST00000558555 SCAND2PQ9GZW5 306 aaPredicted RBP27.31■■□□□ 1.96
MEIS3-204ENST00000558555 WBP1LQ9NX94 342 aa27.31■■□□□ 1.96
MEIS3-204ENST00000558555 ADAMTS3O15072 1205 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 ALAS1P13196 640 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 TAL1P17542 331 aaPredicted RBP27.3■■□□□ 1.96
MEIS3-204ENST00000558555 HERVK_113P62684 666 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 MCTP2Q6DN12 878 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 ANKRD23Q86SG2 305 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 CCDC102AQ96A19 550 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 ATP2A1O14983 1001 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 FOXN1O15353 648 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 FIBPO43427 364 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 UBE2SQ16763 222 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 JAKMIP3Q5VZ66 844 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 LBX2Q6XYB7 198 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 TEX13BQ9BXU2 312 aa27.3■■□□□ 1.96
MEIS3-204ENST00000558555 A0A0G2JMZ2 1700 aa27.29■■□□□ 1.96
MEIS3-204ENST00000558555 MANSC4A6NHS7 340 aaPredicted RBP27.29■■□□□ 1.96
MEIS3-204ENST00000558555 SLC10A3P09131 477 aa27.29■■□□□ 1.96
MEIS3-204ENST00000558555 PLS1Q14651 629 aa27.29■■□□□ 1.96
MEIS3-204ENST00000558555 TMEM132BQ14DG7 1078 aa27.29■■□□□ 1.96
MEIS3-204ENST00000558555 NONOQ15233 471 aaKnown RBP eCLIP27.29■■□□□ 1.96
MEIS3-204ENST00000558555 NFKBIBQ15653 356 aa27.29■■□□□ 1.96
MEIS3-204ENST00000558555 SNRNP48Q6IEG0 339 aaKnown RBP27.29■■□□□ 1.96
MEIS3-204ENST00000558555 USP28Q96RU2 1077 aa27.29■■□□□ 1.96
MEIS3-204ENST00000558555 DDX11L8A8MPP1 907 aa27.28■■□□□ 1.96
MEIS3-204ENST00000558555 BTBD19C9JJ37 291 aa27.28■■□□□ 1.96
MEIS3-204ENST00000558555 TRAPPC10P48553 1259 aa27.28■■□□□ 1.96
MEIS3-204ENST00000558555 CEBPZQ03701 1054 aaKnown RBP27.28■■□□□ 1.96
MEIS3-204ENST00000558555 EARS2Q5JPH6 523 aaKnown RBP27.28■■□□□ 1.96
MEIS3-204ENST00000558555 MCF2L2Q86YR7 1114 aa27.28■■□□□ 1.96
MEIS3-204ENST00000558555 GTF3C2Q8WUA4 911 aaPredicted RBP27.28■■□□□ 1.96
MEIS3-204ENST00000558555 TMEM260Q9NX78 707 aa27.28■■□□□ 1.96
MEIS3-204ENST00000558555 ZNF214Q9UL59 606 aaPredicted RBP27.28■■□□□ 1.96
MEIS3-204ENST00000558555 FAM205CA6NFA0 338 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 FAM155AB1AL88 458 aaPredicted RBP27.27■■□□□ 1.96
MEIS3-204ENST00000558555 PDHXO00330 501 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 CLK2P49760 499 aaKnown RBP27.27■■□□□ 1.96
MEIS3-204ENST00000558555 TKFCQ3LXA3 575 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 USP17L6PQ6QN14 398 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 SPATA32Q96LK8 384 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 HOMER2Q9NSB8 354 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 GCOM1H8Y6P7 765 aaPredicted RBP27.27■■□□□ 1.96
MEIS3-204ENST00000558555 POLR2MP0CAP2 368 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 STAT3P40763 770 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 AP3B2Q13367 1082 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 NOM1Q5C9Z4 860 aaKnown RBP27.27■■□□□ 1.96
MEIS3-204ENST00000558555 TRERF1Q96PN7 1200 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 GDPD2Q9HCC8 539 aa27.27■■□□□ 1.96
MEIS3-204ENST00000558555 POLR3EQ9NVU0 708 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms