RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 ZDHHC1Q8WTX9 485 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 PPM1EQ8WY54 764 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 NINJ1Q92982 152 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 NEUROD6Q96NK8 337 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ARPC5LQ9BPX5 153 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 SENP7Q9BQF6 1050 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 DBNDD2Q9BQY9 259 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ZNF652Q9Y2D9 606 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ZDHHC9Q9Y397 364 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 PARP3Q9Y6F1 533 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ABCA3Q99758 1704 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 GLI3P10071 1580 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 MROH5Q6ZUA9 1318 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 A0A1B0GUL7 405 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 KIF4AO95239 1232 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 XRCC6P12956 609 aaKnown RBP eCLIP8.35□□□□□ -1.07
MARK3-212ENST00000558223 POU3F3P20264 500 aaPredicted RBP8.35□□□□□ -1.07
MARK3-212ENST00000558223 GIPRP48546 466 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 GUCY2FP51841 1108 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 HMGN5P82970 282 aaKnown RBP8.35□□□□□ -1.07
MARK3-212ENST00000558223 CCDC173Q0VFZ6 552 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 SEZ6Q53EL9 994 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 HS1BP3Q53T59 392 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 TTC39AQ5SRH9 613 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 ZMYM1Q5SVZ6 1142 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 ATL3Q6DD88 541 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
MARK3-212ENST00000558223 NLRP10Q86W26 655 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
MARK3-212ENST00000558223 PHC3Q8NDX5 983 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 FAM227BQ96M60 508 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 ASAP1Q9ULH1 1129 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 SPEF2Q9C093 1822 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 ARFGEF2Q9Y6D5 1785 aa8.35□□□□□ -1.07
MARK3-212ENST00000558223 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 WDR19Q8NEZ3 1342 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 A0A0D9SFI3 127 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 NPHP1O15259 732 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 DDAH1O94760 285 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 SYT1P21579 422 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 GARTP22102 1010 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 CTSWP56202 376 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 UBE2HP62256 183 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 LMNB2Q03252 620 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 MCL1Q07820 350 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 CAMK2GQ13555 558 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 HIF1AQ16665 826 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 LDHAL6AQ6ZMR3 332 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 PAF1Q8N7H5 531 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 KLHDC4Q8TBB5 520 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 TRIM44Q96DX7 344 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 SLC39A13Q96H72 371 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 SCAND2PQ9GZW5 306 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 ZNF700Q9H0M5 742 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 TMX4Q9H1E5 349 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 EHD4Q9H223 541 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 IL25Q9H293 177 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 ZSCAN16Q9H4T2 348 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 AVENQ9NQS1 362 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 STK17AQ9UEE5 414 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
MARK3-212ENST00000558223 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 TLR6Q9Y2C9 796 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 ZNF609O15014 1411 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 AK9Q5TCS8 1911 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 RTL9Q8NET4 1388 aa8.34□□□□□ -1.07
MARK3-212ENST00000558223 PLCH1Q4KWH8 1693 aa8.34□□□□□ -1.08
MARK3-212ENST00000558223 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
MARK3-212ENST00000558223 NRDCO43847 1150 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 GJB6O95452 261 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 F13A1P00488 732 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 IL2RAP01589 272 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 CD53P19397 219 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 CDC27P30260 824 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 LIG3P49916 1009 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 EIF5P55010 431 aaKnown RBP8.33□□□□□ -1.08
MARK3-212ENST00000558223 FCGRTP55899 365 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 POU5F1BQ06416 359 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 ARID5BQ14865 1188 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 ATP2B3Q16720 1220 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 IMMTQ16891 758 aaKnown RBP8.33□□□□□ -1.08
MARK3-212ENST00000558223 UVSSAQ2YD98 709 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 METTL24Q5JXM2 366 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 PERM1Q5SV97 790 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 LRSAM1Q6UWE0 723 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 ZNF34Q8IZ26 560 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 UBR7Q8N806 425 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 C3orf58Q8NDZ4 430 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 TTLL11Q8NHH1 800 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 LPIN2Q92539 896 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
MARK3-212ENST00000558223 TRIM47Q96LD4 638 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms