RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 IRF6O14896 467 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 ICAM1P05362 532 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 UBE2SQ16763 222 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 CEP131Q9UPN4 1083 aa16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 RBBP6Q7Z6E9 1792 aaKnown RBP16.54■□□□□ 0.24
ARHGEF40-208ENST00000557498 ZNF536O15090 1300 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 WNT7AO00755 349 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 ZBED4O75132 1171 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 PPP6R2O75170 966 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 BMP15O95972 392 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 DSG3P32926 999 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 ME1P48163 572 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 INF2Q27J81 1249 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 GADL1Q6ZQY3 521 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 C2orf69Q8N8R5 385 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 PNMA2Q9UL42 364 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 CCPG1Q9ULG6 757 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 MRPL11Q9Y3B7 192 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
ARHGEF40-208ENST00000557498 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 OPLAHO14841 1288 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 GJA5P36382 358 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 AP3B2Q13367 1082 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 COG2Q14746 738 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 TREML2Q5T2D2 321 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 MCTP2Q6DN12 878 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF40-208ENST00000557498 PIK3CDO00329 1044 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 VWA5AO00534 786 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 MEIS2O14770 477 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 ZNF174Q15697 407 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 REPS2Q8NFH8 660 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 TBCKQ8TEA7 893 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 AGBL1Q96MI9 1066 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 RAVER2Q9HCJ3 691 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
ARHGEF40-208ENST00000557498 SMCHD1A6NHR9 2005 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 UTRNP46939 3433 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 A0A1W2PQ27 194 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 A0A1W2PQ64 194 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 A0A1W2PQD8 194 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 CUTAO60888 179 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 OAZ1P54368 228 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 SNAPC2Q13487 334 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 ADALQ6DHV7 355 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 WNK4Q96J92 1243 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 ANO3Q9BYT9 981 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 AGTPBP1Q9UPW5 1226 aa16.5■□□□□ 0.23
ARHGEF40-208ENST00000557498 MCM7P33993 719 aa16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 ORC2Q13416 577 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 MOGSQ13724 837 aa16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 AXDND1Q5T1B0 1012 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 CST9Q5W186 159 aa16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 KRI1Q8N9T8 703 aaKnown RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 GPBP1L1Q9HC44 474 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 FBXO2Q9UK22 296 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 MYH7BA7E2Y1 1941 aa16.49■□□□□ 0.23
ARHGEF40-208ENST00000557498 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 ALAS1P13196 640 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 LIG1P18858 919 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 PTPREP23469 700 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 GHRHRQ02643 423 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 LETM2Q2VYF4 491 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms