RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 DIS3Q9Y2L1 958 aaKnown RBP7.2□□□□□ -1.26
VRK1-207ENST00000557352 NCANO14594 1321 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 A0A1W2PQ27 194 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 A0A1W2PQ64 194 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 A0A1W2PQC6 194 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 A0A1W2PQD8 194 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 PRRG2O14669 202 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 CD3EP07766 207 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 TMEM62Q0P6H9 643 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 PPP2R5DQ14738 602 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 CBX2Q14781 532 aaPredicted RBP7.19□□□□□ -1.26
VRK1-207ENST00000557352 TCERG1LQ5VWI1 586 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 RPTNQ6XPR3 784 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 MZB1Q8WU39 189 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 PTCHD1Q96NR3 888 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 KLHL25Q9H0H3 589 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 EPB41L4AQ9HCS5 686 aaPredicted RBP7.19□□□□□ -1.26
VRK1-207ENST00000557352 WHRNQ9P202 907 aa7.19□□□□□ -1.26
VRK1-207ENST00000557352 UNCXA6NJT0 531 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 B8ZZF3 427 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 IRS4O14654 1257 aaPredicted RBP7.18□□□□□ -1.26
VRK1-207ENST00000557352 NASPP49321 788 aaPredicted RBP7.18□□□□□ -1.26
VRK1-207ENST00000557352 SLC7A5Q01650 507 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 HEATR6Q6AI08 1181 aaKnown RBP7.18□□□□□ -1.26
VRK1-207ENST00000557352 LDHDQ86WU2 507 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 ADCY4Q8NFM4 1077 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 SHDQ96IW2 340 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 PARD6AQ9NPB6 346 aa7.18□□□□□ -1.26
VRK1-207ENST00000557352 TRIM26Q12899 539 aaPredicted RBP7.17□□□□□ -1.26
VRK1-207ENST00000557352 IGDCC3Q8IVU1 814 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 TMEM151BQ8IW70 566 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 TMEFF1Q8IYR6 380 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 KLHL6Q8WZ60 621 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 DACT3Q96B18 629 aaPredicted RBP7.17□□□□□ -1.26
VRK1-207ENST00000557352 MCMBPQ9BTE3 642 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 GBP3Q9H0R5 595 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 PCDHA5Q9Y5H7 936 aa7.17□□□□□ -1.26
VRK1-207ENST00000557352 TBC1D8O95759 1140 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 EPHX1P07099 455 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 BMP7P18075 431 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 MAPKAPK2P49137 400 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 CTSWP56202 376 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 NR1I3Q14994 352 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 PPP2R5EQ16537 467 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 PLEKHN1Q494U1 663 aaPredicted RBP7.16□□□□□ -1.26
VRK1-207ENST00000557352 ADAT2Q7Z6V5 191 aaKnown RBP7.16□□□□□ -1.26
VRK1-207ENST00000557352 CPLX3Q8WVH0 158 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 FGD4Q96M96 766 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 KCNC2Q96PR1 638 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 PDLIM7Q9NR12 457 aa7.16□□□□□ -1.26
VRK1-207ENST00000557352 VAMP4O75379 141 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 DBHP09172 617 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 AFF3P51826 1226 aaKnown RBP7.15□□□□□ -1.26
VRK1-207ENST00000557352 NCKAP1LP55160 1127 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 CORO7P57737 925 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 LCE5AQ5TCM9 118 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 RCSD1Q6JBY9 416 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 MARCH10Q8NA82 808 aaPredicted RBP7.15□□□□□ -1.26
VRK1-207ENST00000557352 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 NLGN2Q8NFZ4 835 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 SEC16BQ96JE7 1060 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.26
VRK1-207ENST00000557352 A0A1W2PQJ5 194 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 AURKAO14965 403 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 SRGAP3O43295 1099 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 TRIM13O60858 407 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 PPM1BO75688 479 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 CYBBP04839 570 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 L1CAMP32004 1257 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 BUD31P41223 144 aaPredicted RBP7.14□□□□□ -1.27
VRK1-207ENST00000557352 CASP7P55210 303 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 EEF1DP3Q658K8 133 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 BICRALQ6AI39 1079 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 CNKSR3Q6P9H4 555 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 ZC3H14Q6PJT7 736 aaKnown RBP7.14□□□□□ -1.27
VRK1-207ENST00000557352 PAQR3Q6TCH7 311 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 FAM129CQ86XR2 697 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 ARHGEF39Q8N4T4 335 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 TGIF2Q9GZN2 237 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 ZCCHC4Q9H5U6 513 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 CGGBP1Q9UFW8 167 aaPredicted RBP7.14□□□□□ -1.27
VRK1-207ENST00000557352 SUSD2Q9UGT4 822 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 IRS2Q9Y4H2 1338 aa7.14□□□□□ -1.27
VRK1-207ENST00000557352 A0A0G2JLL6 359 aaPredicted RBP7.13□□□□□ -1.27
VRK1-207ENST00000557352 STXBP3O00186 592 aa7.13□□□□□ -1.27
VRK1-207ENST00000557352 BUB1BO60566 1050 aaPredicted RBP7.13□□□□□ -1.27
VRK1-207ENST00000557352 TACR1P25103 407 aa7.13□□□□□ -1.27
VRK1-207ENST00000557352 ZNF200P98182 395 aaPredicted RBP7.13□□□□□ -1.27
VRK1-207ENST00000557352 DPY19L1Q2PZI1 675 aa7.13□□□□□ -1.27
VRK1-207ENST00000557352 FAM169BQ8N8A8 192 aa7.13□□□□□ -1.27
VRK1-207ENST00000557352 RCC1LQ96I51 464 aaKnown RBP7.13□□□□□ -1.27
VRK1-207ENST00000557352 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
VRK1-207ENST00000557352 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
VRK1-207ENST00000557352 KIAA1211LQ6NV74 962 aa7.12□□□□□ -1.27
VRK1-207ENST00000557352 VHLLQ6RSH7 139 aa7.12□□□□□ -1.27
VRK1-207ENST00000557352 INPP5FQ9Y2H2 1132 aa7.12□□□□□ -1.27
VRK1-207ENST00000557352 C2orf71A6NGG8 1288 aa7.11□□□□□ -1.27
VRK1-207ENST00000557352 IGFBP6P24592 240 aaPredicted RBP7.11□□□□□ -1.27
VRK1-207ENST00000557352 AMPD2Q01433 879 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms