RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 TKFCQ3LXA3 575 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 TMEM240Q5SV17 173 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 NAPBQ9H115 298 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 INCENPQ9NQS7 918 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 RNF146Q9NTX7 359 aa12.71□□□□□ -0.37
HNRNPC-230ENST00000557201 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.38
HNRNPC-230ENST00000557201 FGRP09769 529 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 FOSL2P15408 326 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 MCCP23508 829 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 SLC1A4P43007 532 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 RCSD1Q6JBY9 416 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 CHD1LQ86WJ1 897 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 CCDC136Q96JN2 1154 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 ANAPC4Q9UJX5 808 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
HNRNPC-230ENST00000557201 ASB14A6NK59 587 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 NMT2O60551 498 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 CSF2RAP15509 400 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 MX1P20591 662 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 PTGS1P23219 599 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 BEX3Q00994 111 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 TNFAIP2Q03169 654 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 PPIGQ13427 754 aaKnown RBP eCLIP12.69□□□□□ -0.381e-9■□□□□ 9.6
HNRNPC-230ENST00000557201 TAPT1Q6NXT6 567 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 PRR12Q9ULL5 1215 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 SMPD1P17405 629 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 SNAP25P60880 206 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 CTDSPL2Q05D32 466 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 TMEM63BQ5T3F8 832 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 USP38Q8NB14 1042 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 TIFAQ96CG3 184 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 ZNF576Q9H609 170 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
HNRNPC-230ENST00000557201 MUC3AQ02505 3323 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 LCTP09848 1927 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 TSPY2A6NKD2 308 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 GRXCR1A8MXD5 290 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 ORC4O43929 436 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 CABYRO75952 493 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 ALAS1P13196 640 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 PBX2P40425 430 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 ALX1Q15699 326 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 ZNF365Q70YC5 407 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 TLK2Q86UE8 772 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 TMEM199Q8N511 208 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 VTI1AQ96AJ9 217 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 VWCEQ96DN2 955 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 PBX4Q9BYU1 374 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 RANBP17Q9H2T7 1088 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 PDGFCQ9NRA1 345 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 Q9Y3F1 56 aa12.68□□□□□ -0.38
HNRNPC-230ENST00000557201 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 ICAM1P05362 532 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 ACRP10323 421 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 CYP2C18P33260 490 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 ITGA7Q13683 1181 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 FBXO16Q8IX29 292 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 CHMP4CQ96CF2 233 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 IL23AQ9NPF7 189 aa12.67□□□□□ -0.38
HNRNPC-230ENST00000557201 UMODL1Q5DID0 1318 aa12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 DYNC1LI2O43237 492 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 IKQ13123 557 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 TTBK2Q6IQ55 1244 aa12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 DCAF4Q8WV16 495 aa12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 SEZ6LQ9BYH1 1024 aa12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 VTA1Q9NP79 307 aa12.66□□□□□ -0.38
HNRNPC-230ENST00000557201 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms