RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 MUC3AQ02505 3323 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
VRTN-202ENST00000557177 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
VRTN-202ENST00000557177 ORC4O43929 436 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 CD4P01730 458 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 FOSL2P15408 326 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 DNAJB2P25686 324 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 SNAP25P60880 206 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 BEX3Q00994 111 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 PPIGQ13427 754 aaKnown RBP eCLIP17.07■□□□□ 0.32
VRTN-202ENST00000557177 ALX1Q15699 326 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 TLK2Q86UE8 772 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 SLC43A3Q8NBI5 491 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 VTI1AQ96AJ9 217 aa17.07■□□□□ 0.32
VRTN-202ENST00000557177 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
VRTN-202ENST00000557177 CSF2RAP15509 400 aa17.06■□□□□ 0.32
VRTN-202ENST00000557177 TMEM240Q5SV17 173 aa17.06■□□□□ 0.32
VRTN-202ENST00000557177 MORC4Q8TE76 937 aa17.06■□□□□ 0.32
VRTN-202ENST00000557177 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
VRTN-202ENST00000557177 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
VRTN-202ENST00000557177 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
VRTN-202ENST00000557177 TLR3O15455 904 aaKnown RBP17.05■□□□□ 0.32
VRTN-202ENST00000557177 CABYRO75952 493 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 ICAM1P05362 532 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 SMPD1P17405 629 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 PTGS1P23219 599 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 GRIN2CQ14957 1233 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 FSCN1Q16658 493 aaKnown RBP17.05■□□□□ 0.32
VRTN-202ENST00000557177 TAPT1Q6NXT6 567 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 CXCL17Q6UXB2 119 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 BTNL9Q6UXG8 535 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 RANBP17Q9H2T7 1088 aaKnown RBP17.05■□□□□ 0.32
VRTN-202ENST00000557177 HELLSQ9NRZ9 838 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 CCPG1Q9ULG6 757 aa17.05■□□□□ 0.32
VRTN-202ENST00000557177 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 PDE1AP54750 535 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
VRTN-202ENST00000557177 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 IQSEC1Q6DN90 963 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
VRTN-202ENST00000557177 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
VRTN-202ENST00000557177 TIFAQ96CG3 184 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 PDGFCQ9NRA1 345 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 CHD7Q9P2D1 2997 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 Q9Y3F1 56 aa17.04■□□□□ 0.32
VRTN-202ENST00000557177 ZMYM6O95789 1325 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 FGAP02671 866 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 PSRC1Q6PGN9 363 aaPredicted RBP17.03■□□□□ 0.32
VRTN-202ENST00000557177 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 PURBQ96QR8 312 aaKnown RBP17.03■□□□□ 0.32
VRTN-202ENST00000557177 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 AP5M1Q9H0R1 490 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 ZNF576Q9H609 170 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 VTA1Q9NP79 307 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 TCP11L1Q9NUJ3 509 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
VRTN-202ENST00000557177 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.32
VRTN-202ENST00000557177 ACRP10323 421 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 CYP2C18P33260 490 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
VRTN-202ENST00000557177 ITGA7Q13683 1181 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 IL23AQ9NPF7 189 aa17.02■□□□□ 0.32
VRTN-202ENST00000557177 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
VRTN-202ENST00000557177 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 NFIBO00712 420 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 ZEB2O60315 1214 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
VRTN-202ENST00000557177 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
VRTN-202ENST00000557177 SLC16A2P36021 539 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 PBX2P40425 430 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 BAATQ14032 418 aaPredicted RBP17.01■□□□□ 0.31
VRTN-202ENST00000557177 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
VRTN-202ENST00000557177 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 HERVK_113Q902F9 699 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 HIPK3Q9H422 1215 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 GBF1Q92538 1859 aa17.01■□□□□ 0.31
VRTN-202ENST00000557177 UMODL1Q5DID0 1318 aa17■□□□□ 0.31
VRTN-202ENST00000557177 PDHBP11177 359 aa17■□□□□ 0.31
VRTN-202ENST00000557177 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
VRTN-202ENST00000557177 DUSP28Q4G0W2 176 aa17■□□□□ 0.31
VRTN-202ENST00000557177 RRP12Q5JTH9 1297 aaKnown RBP17■□□□□ 0.31
VRTN-202ENST00000557177 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
VRTN-202ENST00000557177 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms