RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 REV1Q9UBZ9 1251 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-243ENST00000556671 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 ADGRB1O14514 1584 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 GARTP22102 1010 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 MPP2Q14168 576 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 CCDC27Q2M243 656 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 MPZL3Q6UWV2 235 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 PRR23BQ6ZRT6 265 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 KCNH3Q9ULD8 1083 aa6.49□□□□□ -1.37
ATXN3-243ENST00000556671 ZBTB7CA1YPR0 619 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 HTR3BO95264 441 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 RAC2P15153 192 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 FAM160A1Q05DH4 1040 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 TSPYL5Q86VY4 417 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-243ENST00000556671 GOLM1Q8NBJ4 401 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 ADAMTS10Q9H324 1103 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 GPATCH2Q9NW75 528 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 DUSP13Q9UII6 198 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 DLC1Q96QB1 1528 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 TECPR2O15040 1411 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 DCCP43146 1447 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 KIF1AQ12756 1690 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 CDC42BPGQ6DT37 1551 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 EVC2Q86UK5 1308 aa6.48□□□□□ -1.37
ATXN3-243ENST00000556671 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
ATXN3-243ENST00000556671 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-243ENST00000556671 USP32Q8NFA0 1604 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
ATXN3-243ENST00000556671 GPRASP1Q5JY77 1395 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 JCADQ9P266 1359 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 SHPRHQ149N8 1683 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 CHURC1-FNTBB4DL54 471 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 GRIN3BO60391 1043 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 DNAJA2O60884 412 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 LRRN2O75325 713 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 TSPAN15O95858 294 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 HPXP02790 462 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 ERVFC1P60507 584 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 ERMP1Q7Z2K6 904 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 REC114Q7Z4M0 266 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 CILP2Q8IUL8 1156 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 ABHD4Q8TB40 342 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-243ENST00000556671 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 KREMEN1Q96MU8 473 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 PPP1R16BQ96T49 567 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 KLHL3Q9UH77 587 aa6.47□□□□□ -1.37
ATXN3-243ENST00000556671 MED1Q15648 1581 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-243ENST00000556671 MINDY4BA8MYZ0 360 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 TNNI2P48788 182 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 HK2P52789 917 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 EGR3Q06889 387 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 FAM196AQ6ZSG2 479 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 FBXO27Q8NI29 283 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 KCNQ5Q9NR82 932 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 KBTBD4Q9NVX7 518 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 AHDC1Q5TGY3 1603 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-243ENST00000556671 ACEP12821 1306 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.38
ATXN3-243ENST00000556671 RGPD5Q99666 1765 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 RAP1GAPP47736 663 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 SPOCD1Q6ZMY3 1216 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 SYDE1Q6ZW31 735 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-243ENST00000556671 FBXO15Q8NCQ5 510 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-243ENST00000556671 VWCEQ96DN2 955 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 DIRC2Q96SL1 478 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 LRRC3Q9BY71 257 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-243ENST00000556671 NSUN3Q9H649 340 aaKnown RBP6.45□□□□□ -1.38
ATXN3-243ENST00000556671 SP110Q9HB58 689 aa6.45□□□□□ -1.38
ATXN3-243ENST00000556671 CCDC9Q9Y3X0 531 aaKnown RBP6.45□□□□□ -1.38
ATXN3-243ENST00000556671 AKAP12Q02952 1782 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 PPIP5K1Q6PFW1 1433 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 RBM47A0AV96 593 aaKnown RBP6.44□□□□□ -1.38
ATXN3-243ENST00000556671 KRT1P04264 644 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 ZGLP1P0C6A0 271 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 FBXL19Q6PCT2 694 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-243ENST00000556671 PHACTR4Q8IZ21 702 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 PDZD8Q8NEN9 1154 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 COPRSQ9NQ92 184 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 PCDHA11Q9Y5I1 949 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 TULP4Q9NRJ4 1543 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
ATXN3-243ENST00000556671 RALGAPBQ86X10 1494 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 GREM1O60565 184 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 TMF1P82094 1093 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 KIF2CQ99661 725 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 PODXL2Q9NZ53 605 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms