RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 GLDCP23378 1020 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 TRHRP34981 398 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-240ENST00000556339 TNNI2P48788 182 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 CHRNA2Q15822 529 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 NBPF8Q3BBV2 869 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 AGMOQ6ZNB7 445 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 FAM13CQ8NE31 585 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 DHX38Q92620 1227 aaKnown RBP5.5□□□□□ -1.53
ATXN3-240ENST00000556339 RNF32Q9H0A6 362 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 CD320Q9NPF0 282 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 USP35Q9P2H5 1018 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 SMG5Q9UPR3 1016 aaKnown RBP5.5□□□□□ -1.53
ATXN3-240ENST00000556339 MYOM2P54296 1465 aa5.5□□□□□ -1.53
ATXN3-240ENST00000556339 PRAG1Q86YV5 1406 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 WASH4PA8MWX3 477 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 B8ZZF3 427 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 PRPF40AO75400 957 aaKnown RBP5.49□□□□□ -1.53
ATXN3-240ENST00000556339 KRT1P04264 644 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 INHBBP09529 407 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 PLCG1P19174 1290 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 YARSP54577 528 aaKnown RBP5.49□□□□□ -1.53
ATXN3-240ENST00000556339 LINC00310P59036 64 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 ZNF605Q86T29 641 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 MCATQ8IVS2 390 aaKnown RBP5.49□□□□□ -1.53
ATXN3-240ENST00000556339 LILRA2Q8N149 483 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 PDZD8Q8NEN9 1154 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 Q96M66 194 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 SLC6A17Q9H1V8 727 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 ADAM30Q9UKF2 790 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 CEP131Q9UPN4 1083 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 RALGAPBQ86X10 1494 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 KIF1AQ12756 1690 aa5.49□□□□□ -1.53
ATXN3-240ENST00000556339 ACEP12821 1306 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 LAMC1P11047 1609 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 FMN2Q9NZ56 1722 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 IFT172Q9UG01 1749 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 MARF1Q9Y4F3 1742 aaKnown RBP5.48□□□□□ -1.53
ATXN3-240ENST00000556339 FITM1A5D6W6 292 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 RBAK-RBAKDNI3L0D1 243 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 MED14OSP0DP75 135 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 RLBP1P12271 317 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 PDE6BP35913 854 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
ATXN3-240ENST00000556339 KCNA1Q09470 495 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 DTWD2Q8NBA8 298 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 CYB5D2Q8WUJ1 264 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 ACSF2Q96CM8 615 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-240ENST00000556339 IRF2BPLQ9H1B7 796 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 DUSP15Q9H1R2 295 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-240ENST00000556339 AK5Q9Y6K8 562 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 KNDC1Q76NI1 1749 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 COL22A1Q8NFW1 1626 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-240ENST00000556339 ANKARQ7Z5J8 1434 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 PRR36Q9H6K5 1346 aa5.48□□□□□ -1.53
ATXN3-240ENST00000556339 NRXN1Q9ULB1 1477 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 PRRG2O14669 202 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 CTSWP56202 376 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 CLEC16AQ2KHT3 1053 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 FAM196AQ6ZSG2 479 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 TTLL10Q6ZVT0 673 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 TSPYL5Q86VY4 417 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-240ENST00000556339 AMIGO3Q86WK7 504 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 DNAJB8Q8NHS0 232 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 DUSP9Q99956 384 aaKnown RBP5.47□□□□□ -1.53
ATXN3-240ENST00000556339 GPR160Q9UJ42 338 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 SLIT2O94813 1529 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 BLMP54132 1417 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-240ENST00000556339 NCANO14594 1321 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 SPATA31A5Q5VU36 1347 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 SPATA31A7Q8IWB4 1347 aa5.47□□□□□ -1.53
ATXN3-240ENST00000556339 CENPJQ9HC77 1338 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-240ENST00000556339 BRWD3Q6RI45 1802 aa5.46□□□□□ -1.53
ATXN3-240ENST00000556339 ZGLP1P0C6A0 271 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 TFE3P19532 575 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-240ENST00000556339 DUSP4Q13115 394 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 GAB4Q2WGN9 574 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 EAPPQ56P03 285 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-240ENST00000556339 MEI1Q5TIA1 1274 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 IRF2BP1Q8IU81 584 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 SPPL2CQ8IUH8 684 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 SIN3AQ96ST3 1273 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 GPR62Q9BZJ7 368 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 ASCC2Q9H1I8 757 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-240ENST00000556339 CWC22Q9HCG8 908 aaKnown RBP5.46□□□□□ -1.54
ATXN3-240ENST00000556339 KLHL3Q9UH77 587 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 RAPGEFL1Q9UHV5 662 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 TLR6Q9Y2C9 796 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 PCDHA11Q9Y5I1 949 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 CORINQ9Y5Q5 1042 aa5.46□□□□□ -1.54
ATXN3-240ENST00000556339 EP400Q96L91 3159 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 KIAA0232Q92628 1395 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 DLC1Q96QB1 1528 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 UPK3BL1B0FP48 263 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 UPK3BL2E5RIL1 263 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 GCP02774 474 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 CHRNEQ04844 493 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 R3HDM1Q15032 1099 aaKnown RBP5.45□□□□□ -1.54
ATXN3-240ENST00000556339 TCP11L2Q8N4U5 519 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 RNF141Q8WVD5 230 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 INTS4Q96HW7 963 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms