RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
CHMP4BP1-201ENST00000556017 UMODL1Q5DID0 1318 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FGRP09769 529 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PDE4BQ07343 736 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TRERF1Q96PN7 1200 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 NAPBQ9H115 298 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ANAPC4Q9UJX5 808 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PRR12Q9ULL5 1215 aa17.06■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ACRP10323 421 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 SMPD1P17405 629 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CYP2C18P33260 490 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 SLC1A4P43007 532 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TNFAIP2Q03169 654 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CXCL17Q6UXB2 119 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 MORC4Q8TE76 937 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PBX4Q9BYU1 374 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 NACAP1Q9BZK3 213 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ZNF576Q9H609 170 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
CHMP4BP1-201ENST00000556017 SCN5AQ14524 2016 aa17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ALAS1P13196 640 aa17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PPIGQ13427 754 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TIFAQ96CG3 184 aa17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 PRDM6Q9NQX0 595 aa17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
CHMP4BP1-201ENST00000556017 XIRP2A4UGR9 3374 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 SCN10AQ9Y5Y9 1956 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ERC2O15083 957 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 MX1P20591 662 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TKFCQ3LXA3 575 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TLK2Q86UE8 772 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FBXO16Q8IX29 292 aaPredicted RBP17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 SPC25Q9HBM1 224 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 STX8Q9UNK0 236 aa17.03■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ASB14A6NK59 587 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ORC4O43929 436 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 ALX1Q15699 326 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 FSCN1Q16658 493 aaKnown RBP17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 CCDC174Q6PII3 467 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 TRPV6Q9H1D0 765 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 WNT8AQ9H1J5 351 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 IL23AQ9NPF7 189 aa17.02■□□□□ 0.32
CHMP4BP1-201ENST00000556017 NCOR1O75376 2440 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TSPY2A6NKD2 308 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 B4GALT4O60513 344 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ICAM1P05362 532 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ITGA7Q13683 1181 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 EEPD1Q7L9B9 569 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 HERVK_113Q902F9 699 aa17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 NOC4LQ9BVI4 516 aaKnown RBP17.01■□□□□ 0.31
CHMP4BP1-201ENST00000556017 BDP1A6H8Y1 2624 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 A0A0D9SFI3 127 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 NFIBO00712 420 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 SLC3A2P08195 630 aaKnown RBP17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 SLC16A2P36021 539 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PSMC6P62333 389 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 IQSEC1Q6DN90 963 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TMEM199Q8N511 208 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 FAM227BQ96M60 508 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 YBX2Q9Y2T7 364 aaKnown RBP17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 Q9Y3F1 56 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TET1Q8NFU7 2136 aa17■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TLR3O15455 904 aaKnown RBP16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 FGAP02671 866 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 BAATQ14032 418 aaPredicted RBP16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 DCAF4Q8WV16 495 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 CLEC4DQ8WXI8 215 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 TMEM47Q9BQJ4 181 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PRDM12Q9H4Q4 367 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 VTA1Q9NP79 307 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 CCPG1Q9ULG6 757 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PTPRSQ13332 1948 aa16.99■□□□□ 0.31
CHMP4BP1-201ENST00000556017 RBM47A0AV96 593 aaKnown RBP16.98■□□□□ 0.31
CHMP4BP1-201ENST00000556017 RANBP6O60518 1105 aaKnown RBP16.98■□□□□ 0.31
CHMP4BP1-201ENST00000556017 CABYRO75952 493 aa16.98■□□□□ 0.31
CHMP4BP1-201ENST00000556017 PDE1AP54750 535 aa16.98■□□□□ 0.31
CHMP4BP1-201ENST00000556017 DUSP28Q4G0W2 176 aa16.98■□□□□ 0.31
CHMP4BP1-201ENST00000556017 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
CHMP4BP1-201ENST00000556017 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms