RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 KIF1AQ12756 1690 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 EIF3AQ14152 1382 aaKnown RBP7.13□□□□□ -1.27
ATXN3-233ENST00000555816 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 ESR1P03372 595 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 TMEM253P0C7T8 217 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 SEPT6Q14141 434 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 AMIGO3Q86WK7 504 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-233ENST00000555816 SLAMF8Q9P0V8 285 aa7.13□□□□□ -1.27
ATXN3-233ENST00000555816 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 HPXP02790 462 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 SRFP11831 508 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 EAPPQ56P03 285 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-233ENST00000555816 LRRC56Q8IYG6 542 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-233ENST00000555816 DNAJB8Q8NHS0 232 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 XAGE3Q8WTP9 111 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 MYLIPQ8WY64 445 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 GPR62Q9BZJ7 368 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 NSUN3Q9H649 340 aaKnown RBP7.12□□□□□ -1.27
ATXN3-233ENST00000555816 GPATCH2Q9NW75 528 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 KIF1BO60333 1816 aa7.12□□□□□ -1.27
ATXN3-233ENST00000555816 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 MED14OSP0DP75 135 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 YARSP54577 528 aaKnown RBP7.11□□□□□ -1.27
ATXN3-233ENST00000555816 TAF1CQ15572 869 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-233ENST00000555816 GAB4Q2WGN9 574 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 TMEM201Q5SNT2 666 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 LILRA2Q8N149 483 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-233ENST00000555816 DUSP9Q99956 384 aaKnown RBP7.11□□□□□ -1.27
ATXN3-233ENST00000555816 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-233ENST00000555816 EPB41L4BQ9H329 900 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 DCP1AQ9NPI6 582 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-233ENST00000555816 RAPGEFL1Q9UHV5 662 aa7.11□□□□□ -1.27
ATXN3-233ENST00000555816 FMN2Q9NZ56 1722 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 C1QTNF9P0C862 333 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 TFE3P19532 575 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-233ENST00000555816 GLDCP23378 1020 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 TPP2P29144 1249 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-233ENST00000555816 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 OXR1Q8N573 874 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 PDZD8Q8NEN9 1154 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 CYB5D2Q8WUJ1 264 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 DHX38Q92620 1227 aaKnown RBP7.1□□□□□ -1.27
ATXN3-233ENST00000555816 ADGRB2O60241 1585 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
ATXN3-233ENST00000555816 DNAJC25-GNG10A0A024R161 153 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 KRT1P04264 644 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 C1QL4Q86Z23 238 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 CREG2Q8IUH2 290 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 ACSF2Q96CM8 615 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-233ENST00000555816 Q96M66 194 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-233ENST00000555816 STK32BQ9NY57 414 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
ATXN3-233ENST00000555816 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
ATXN3-233ENST00000555816 SSH2Q76I76 1423 aa7.09□□□□□ -1.28
ATXN3-233ENST00000555816 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 GCP02774 474 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 ZSCAN22P10073 491 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-233ENST00000555816 NR0B2Q15466 257 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 DDB1Q16531 1140 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 RALGPS1Q5JS13 557 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 TSPYL5Q86VY4 417 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-233ENST00000555816 SLFN12Q8IYM2 578 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 RNF141Q8WVD5 230 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 DIRC2Q96SL1 478 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 PPLO60437 1756 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 CPDO75976 1380 aa7.08□□□□□ -1.28
ATXN3-233ENST00000555816 ACEP12821 1306 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 FITM1A5D6W6 292 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 BPNT1O95861 308 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 DAB2P98082 770 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 SNX17Q15036 470 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 MAP3K11Q16584 847 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATXN3-233ENST00000555816 IRF2BP1Q8IU81 584 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 SPPL2CQ8IUH8 684 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 PPP1R13LQ8WUF5 828 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 DPH2Q9BQC3 489 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-233ENST00000555816 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 ADAMTS10Q9H324 1103 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
ATXN3-233ENST00000555816 CD320Q9NPF0 282 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 DUSP13Q9UII6 198 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
ATXN3-233ENST00000555816 DLC1Q96QB1 1528 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 ANKRD33BA6NCL7 494 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 CILPO75339 1184 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 PLCG1P19174 1290 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 HK2P52789 917 aa7.06□□□□□ -1.28
ATXN3-233ENST00000555816 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms