RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 HIP1O00291 1037 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 PLA2G6O60733 806 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 FDX1P10109 184 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 SNX17Q15036 470 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 USH1GQ495M9 461 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 Q7L0L9 218 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 MSL3Q8N5Y2 521 aaKnown RBP16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 DSCC1Q9BVC3 393 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 TNKSO95271 1327 aa16.16■□□□□ 0.18
SDR39U1-214ENST00000555778 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 BEX3Q00994 111 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 TLE2Q04725 743 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 KCNA10Q16322 511 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 TKFCQ3LXA3 575 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 TMEM63BQ5T3F8 832 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 PDGFCQ9NRA1 345 aa16.15■□□□□ 0.18
SDR39U1-214ENST00000555778 CALML3P27482 149 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 ACLYP53396 1101 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 BTNL9Q6UXG8 535 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 TLK2Q86UE8 772 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 ENAHQ8N8S7 591 aaPredicted RBP16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 BADQ92934 168 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 UBA5Q9GZZ9 404 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 STARD7Q9NQZ5 370 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 TAF6LQ9Y6J9 622 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 CDH23Q9H251 3354 aa16.14■□□□□ 0.17
SDR39U1-214ENST00000555778 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 SNHG28P0DPA3 235 aa16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 PCP11498 1178 aaKnown RBP16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 ITGB8P26012 769 aa16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 ZSCAN10Q96SZ4 725 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
SDR39U1-214ENST00000555778 ASGR1P07306 291 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 CLTBP09497 229 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 TNFAIP2Q03169 654 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 PTH1RQ03431 593 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 CDC37Q16543 378 aaPredicted RBP16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 C9orf50Q5SZB4 431 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 KLHDC9Q8NEP7 349 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 UPF3AQ9H1J1 476 aaKnown RBP16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 RAD50Q92878 1312 aa16.12■□□□□ 0.17
SDR39U1-214ENST00000555778 ASB14A6NK59 587 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 CTAGE5O15320 804 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 DHX16O60231 1041 aaKnown RBP16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 SMPD1P17405 629 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 CHMLP26374 656 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 ALDH5A1P51649 535 aaPredicted RBP16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 VTI1AQ96AJ9 217 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 EYSQ5T1H1 3165 aa16.11■□□□□ 0.17
SDR39U1-214ENST00000555778 MOXD2PA6NHM9 499 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 CST5P28325 142 aaPredicted RBP16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 GJA9P57773 515 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 GNASQ5JWF2 1037 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 CXCL17Q6UXB2 119 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 DEFB123Q8N688 67 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 TTC14Q96N46 770 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
SDR39U1-214ENST00000555778 EPHB4P54760 987 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 FAAP100Q0VG06 881 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 SHHQ15465 462 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 LRIT3Q3SXY7 679 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 TAPT1Q6NXT6 567 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 GLT1D1Q96MS3 346 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 KRT23Q9C075 422 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 TMEM39AQ9NV64 488 aa16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
SDR39U1-214ENST00000555778 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 CYP21A2P08686 494 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 RAG1P15918 1043 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 STOX1Q6ZVD7 989 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms