RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 PAPD7Q5XG87 772 aaKnown RBP18.12■□□□□ 0.49
TUBB3-209ENST00000555609 C15orf52Q6ZUT6 534 aaKnown RBP18.12■□□□□ 0.49
TUBB3-209ENST00000555609 NBPF5PQ86XG9 351 aaPredicted RBP18.12■□□□□ 0.49
TUBB3-209ENST00000555609 ATRIPQ8WXE1 791 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 KRT86O43790 486 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 CDC25AP30304 524 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 ZBED6P86452 979 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 CABP7Q86V35 215 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 GPKOWQ92917 476 aaPredicted RBP eCLIP18.12■□□□□ 0.49
TUBB3-209ENST00000555609 P2RX5Q93086 422 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 C6orf50Q9HD87 102 aa18.12■□□□□ 0.49
TUBB3-209ENST00000555609 EIF3CLB5ME19 914 aaKnown RBP18.11■□□□□ 0.49
TUBB3-209ENST00000555609 hCG_1984214I3L0E3 225 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 ADAMTS3O15072 1205 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 IPO7O95373 1038 aaKnown RBP18.11■□□□□ 0.49
TUBB3-209ENST00000555609 OR52Z1P0C646 297 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 EVX2Q03828 476 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 INF2Q27J81 1249 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 ZNF713Q8N859 430 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-209ENST00000555609 EIF3CQ99613 913 aaKnown RBP18.11■□□□□ 0.49
TUBB3-209ENST00000555609 CHP1Q99653 195 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 TSGA10Q9BZW7 698 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 TTYH3Q9C0H2 523 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 ZSWIM4Q9H7M6 989 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 VIPAS39Q9H9C1 493 aa18.11■□□□□ 0.49
TUBB3-209ENST00000555609 REXO2Q9Y3B8 237 aaKnown RBP18.11■□□□□ 0.49
TUBB3-209ENST00000555609 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 TARSL2A2RTX5 802 aaKnown RBP18.1■□□□□ 0.49
TUBB3-209ENST00000555609 NONOQ15233 471 aaKnown RBP eCLIP18.1■□□□□ 0.49
TUBB3-209ENST00000555609 MAP9Q49MG5 647 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 HEATR3Q7Z4Q2 680 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 CSGALNACT2Q8N6G5 542 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 ERGIC2Q96RQ1 377 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 PNKPQ96T60 521 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 TUBGCP2Q9BSJ2 902 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 ABCB11O95342 1321 aa18.1■□□□□ 0.49
TUBB3-209ENST00000555609 ESYT2A0FGR8 921 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 COBLO75128 1261 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 FGFR1OPO95684 399 aaKnown RBP18.09■□□□□ 0.49
TUBB3-209ENST00000555609 TM4SF1P30408 202 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 CNNM4Q6P4Q7 775 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 FOXR2Q6PJQ5 311 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 ZSCAN29Q8IWY8 852 aaPredicted RBP18.09■□□□□ 0.49
TUBB3-209ENST00000555609 DUSP9Q99956 384 aaKnown RBP18.09■□□□□ 0.49
TUBB3-209ENST00000555609 TMEM47Q9BQJ4 181 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 ABCB6Q9NP58 842 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 SAR1BQ9Y6B6 198 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 FLT1P17948 1338 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 TRIM49BA6NDI0 452 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 ERICH4A6NGS2 130 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 CYTH3O43739 400 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 ZPR1O75312 459 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 WDR59Q6PJI9 974 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 RASGRP4Q8TDF6 673 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 TRIM9Q9C026 710 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 MED4Q9NPJ6 270 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 ADAM21Q9UKJ8 722 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 GUCA1BQ9UMX6 200 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 MAPK8IP1Q9UQF2 711 aa18.09■□□□□ 0.49
TUBB3-209ENST00000555609 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.49
TUBB3-209ENST00000555609 TBC1D8BQ0IIM8 1120 aa18.08■□□□□ 0.49
TUBB3-209ENST00000555609 CCDC122Q5T0U0 273 aa18.08■□□□□ 0.49
TUBB3-209ENST00000555609 IQCEQ6IPM2 695 aa18.08■□□□□ 0.49
TUBB3-209ENST00000555609 FAM71BQ8TC56 605 aa18.08■□□□□ 0.49
TUBB3-209ENST00000555609 SH3RF3Q8TEJ3 882 aaPredicted RBP18.08■□□□□ 0.49
TUBB3-209ENST00000555609 TAF1P21675 1872 aa18.08■□□□□ 0.48
TUBB3-209ENST00000555609 MYH8P13535 1937 aa18.08■□□□□ 0.48
TUBB3-209ENST00000555609 KLRF2D3W0D1 207 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 PLCG2P16885 1265 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 PLCG1P19174 1290 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 RASA1P20936 1047 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 HNRNPH3P31942 346 aaKnown RBP18.07■□□□□ 0.48
TUBB3-209ENST00000555609 USP14P54578 494 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 HERVK_113P62684 666 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 PDE4DQ08499 809 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 FKBP15Q5T1M5 1219 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 ZNF804AQ7Z570 1209 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 NEK8Q86SG6 692 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 KIAA1328Q86T90 577 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 NEDD1Q8NHV4 660 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 RUBCNQ92622 972 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 RRP36Q96EU6 259 aaKnown RBP18.07■□□□□ 0.48
TUBB3-209ENST00000555609 CALML4Q96GE6 196 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 LRRC27Q9C0I9 530 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 CWC15Q9P013 229 aaKnown RBP18.07■□□□□ 0.48
TUBB3-209ENST00000555609 PVALEFA0A1B0GWK0 134 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 KCNQ2O43526 872 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 TRIM21P19474 475 aaKnown RBP18.07■□□□□ 0.48
TUBB3-209ENST00000555609 NAPAP54920 295 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 HNRNPH2P55795 449 aaKnown RBP18.07■□□□□ 0.48
TUBB3-209ENST00000555609 VSNL1P62760 191 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 SLC35G1Q2M3R5 365 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 SOGA3Q5TF21 947 aa18.07■□□□□ 0.48
TUBB3-209ENST00000555609 ARHGAP27Q6ZUM4 889 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms